Gene Jden_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2256 
Symbol 
ID8381412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2446537 
End bp2446923 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content62% 
IMG OID645005015 
ProductProtein-tyrosine phosphatase, low molecular weight 
Protein accessionYP_003162194 
Protein GI256833467 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.829785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATTCCC TCATTGAGGG CTCGAACCCT ATGGCGGCTG CGCTCATGCG TCAGGTTGCC 
GGTGATTCGG TGTCAGTGGC CTCTGCGGGC ACTAAGCCTG GTGACACGCT CAACGGGTTG
GCCGTGGAGT CATTGGAGGC CGTGGGAGCT TCAGTTGAGG GGGAGCGCCC GAAGCTCTTG
ACAGAGGGCA TGATGCAAGC GGCTGACCGG ATGATTGTCC TTGGCGAGGA AGCGCAGCTT
CCCCAAGTGG ATGGTGTCAC GGTGGAACGG TGGATCACCG ACGAACCCTC AGAACGTGGC
ATTGACGGGC GTGAACGAAT GGACCTGGTG CGTGACGACA TTGCCACCCG GGTGCAAGCG
CTGACCGATG CGCTCACCCG CCTGTGA
 
Protein sequence
MYSLIEGSNP MAAALMRQVA GDSVSVASAG TKPGDTLNGL AVESLEAVGA SVEGERPKLL 
TEGMMQAADR MIVLGEEAQL PQVDGVTVER WITDEPSERG IDGRERMDLV RDDIATRVQA
LTDALTRL