| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2244 |
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| Symbol | |
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| ID | 8381401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2432620 |
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| End bp | 2433987 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645005003 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003162183 |
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| Protein GI | 256833456 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.846858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTCGTT CTGCGTTCGG AAAGGTTGTG GACACCCAAG TGTCACGCCG CACCATCCTC
CAAGCATCAG GTCTTGGCGC ACTCGGTTTC GCGTTAGCAG CCTGCTCAGG GCCCGCAACC
GGTGAAGAAT TAACGAACAC CCAAACAGAC GACGTGGACT GGTCCACAAT TACCCCCGCC
ACAGAAATCA CCTGGTGGTC CAACCACCCA GGATCCTCCA AAGACGCCGA AGACGAACTG
ATCCGCCAGT TCACGGAGAA GACCGGGATC GCCGTCAAAC TCGTCACCGC CGGCGCATCC
TACGACGAGG TCGCCCAACG GTTCCAAGCC GCATCAGGCA CAGACTCCCT ACCAGACCTC
GTGATCGCCT CCGACGTGTG GTGGTTCCGT TACTTCCTCA ACGGCCAAAT CATGCCACTC
GACGGGGTGT TCACACACCT CAAGGTCGAC ACCAGCGACT ACAACCCCAC CCTGTACGGT
GACTACGAAT TCGACGGCGC CCACTACGCA GCCCCCTACG CGCGCTCCAC ACCGCTGTTC
TACTACAACA AGGACGTCTT CAAGAAAGCG GGGCTGCCCG ACCGTGGCCC CCGCACCTGG
GACGAATTTG AGCAGTGGGC CCCCAAACTC CAAGAAGTCC TCCCCGCTGA CGGGGCACCC
CTGGGACTAG GCGTTGGCAC CTCCTGGTCC GCATGGTGGA TGCTCAACGT CCTGTGGGGA
CGCGGAGCCA CCTACTCCAA CGAATGGGAC ATCACCCTCA ACACCCCCGA AGCAATCGCC
GCTGGGGAAT GGGTACGCGA GCTCTACCAC GACAAAAAGT TCGCCTCCAT CGGCAACGAC
ACCAACGCCG ACTTCGCCGC CGGATACTTC GGCTGCCTCA TTGGCTCCAC CGGGTCACTC
ACCGGACTCC TCGACGCCGC CACCTTCAAC CTCGGTGCCT CCTTCCTCCC CGAAGGACCC
GAAGGACCAG GAGTACCTAC CGGCGGCACC GGCCTTGCCA TCCCCTCATC ACGCTCCCCC
GAACAACAAC TCGCCGCCGC CATGTTCCTC GACTTCCTCA CCAACGCAGA AAGCACCGCG
TTCTTCTCCA AATCCACCGG GTACATGCCC GTGCGCACCT CAGCAACAAC TGGCCCCACC
ATGACCGCCC TCTACGACGA GATCCCCCTC TACCGGGTCG CAATCGACCA ACTCGCCATC
ACCCGGTCAC AAGACTGGGT CCGCGTATTC GTCCCCTCCG GCGACCAAAT CCTCTCCGAA
GGCATCGAAC AGATAGTGTT AAAGAACACC CCAGCACAGC AAGCATGGGA ATCAATCACC
CCACGCCTTG ACCGCGCCTT CACCGAGAAC GTGGAACCCT ACCTGTGA
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| Protein sequence | MSRSAFGKVV DTQVSRRTIL QASGLGALGF ALAACSGPAT GEELTNTQTD DVDWSTITPA
TEITWWSNHP GSSKDAEDEL IRQFTEKTGI AVKLVTAGAS YDEVAQRFQA ASGTDSLPDL
VIASDVWWFR YFLNGQIMPL DGVFTHLKVD TSDYNPTLYG DYEFDGAHYA APYARSTPLF
YYNKDVFKKA GLPDRGPRTW DEFEQWAPKL QEVLPADGAP LGLGVGTSWS AWWMLNVLWG
RGATYSNEWD ITLNTPEAIA AGEWVRELYH DKKFASIGND TNADFAAGYF GCLIGSTGSL
TGLLDAATFN LGASFLPEGP EGPGVPTGGT GLAIPSSRSP EQQLAAAMFL DFLTNAESTA
FFSKSTGYMP VRTSATTGPT MTALYDEIPL YRVAIDQLAI TRSQDWVRVF VPSGDQILSE
GIEQIVLKNT PAQQAWESIT PRLDRAFTEN VEPYL
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