Gene Jden_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2162 
Symbol 
ID8381320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2340947 
End bp2341699 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content54% 
IMG OID645004915 
ProductHNH endonuclease 
Protein accessionYP_003162102 
Protein GI256833375 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.097975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCT GCACCATCCA AGGATGCGAA CGCAAACACC AAGCCAAAGG CTACTGCGGC 
TCCCACTACA ACCAAATCCT CAAACCAAAC CGCCACCGCA AAGAAGCAGT GGCATGCGAC
TGGTGCGGGA CAACCTGCTA CAAAGAACCA AGCAGACACA ACAAATACCA ACACGTCTAC
TGCACACTCC AATGCCGCGA CACGCACCGC ACAGCATTAT CGAGGCTGCA AGCAGGACCA
CCACTAAACT TCCTCGGATA CTGGTTCAAC TGTGAACACT GCGGGTCCGA GTTCCATACC
AAGGCAATCA ACGGCAAGTA CTGCAGCACC CCTTGCTCAT CCCGCGCCCA CGCCAGAGCA
CGAGTGAAGA CCCAAACCGA GGACGAATGG TTGGCCTTCA ACAGGAAATG CATGGAGTGC
GGGCAAGCAT ACAGGCACAA GAGGCAAAAC CGGCTGCACT GTAGCGACAG ATGCAGGGAC
ATTGCGGCTG ATAAGCGCGG CGCAGTTCTA CATCGCGGAT GGATTCGAGA TGGAATACGC
AAGGCTATCT ACGAGCGAGA TGGTTATGTA TGCTGGATCT GCAACAAACT ATGCGACACC
AGCGTGGACC CGCAAACTCA CAACGATGCA CCGACTCTTG ATCACATAAT TCCACGATCT
AAAGGCGGAA CCCACGAGGA AAGCAACCTA AAGACAGCAC ACCGCATCTG CAATTCTTTG
CGCGGCGACG GAGGGGTTGA AGTTCTCTTC TAA
 
Protein sequence
MKTCTIQGCE RKHQAKGYCG SHYNQILKPN RHRKEAVACD WCGTTCYKEP SRHNKYQHVY 
CTLQCRDTHR TALSRLQAGP PLNFLGYWFN CEHCGSEFHT KAINGKYCST PCSSRAHARA
RVKTQTEDEW LAFNRKCMEC GQAYRHKRQN RLHCSDRCRD IAADKRGAVL HRGWIRDGIR
KAIYERDGYV CWICNKLCDT SVDPQTHNDA PTLDHIIPRS KGGTHEESNL KTAHRICNSL
RGDGGVEVLF