Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2162 |
Symbol | |
ID | 8381320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2340947 |
End bp | 2341699 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645004915 |
Product | HNH endonuclease |
Protein accession | YP_003162102 |
Protein GI | 256833375 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.097975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCT GCACCATCCA AGGATGCGAA CGCAAACACC AAGCCAAAGG CTACTGCGGC TCCCACTACA ACCAAATCCT CAAACCAAAC CGCCACCGCA AAGAAGCAGT GGCATGCGAC TGGTGCGGGA CAACCTGCTA CAAAGAACCA AGCAGACACA ACAAATACCA ACACGTCTAC TGCACACTCC AATGCCGCGA CACGCACCGC ACAGCATTAT CGAGGCTGCA AGCAGGACCA CCACTAAACT TCCTCGGATA CTGGTTCAAC TGTGAACACT GCGGGTCCGA GTTCCATACC AAGGCAATCA ACGGCAAGTA CTGCAGCACC CCTTGCTCAT CCCGCGCCCA CGCCAGAGCA CGAGTGAAGA CCCAAACCGA GGACGAATGG TTGGCCTTCA ACAGGAAATG CATGGAGTGC GGGCAAGCAT ACAGGCACAA GAGGCAAAAC CGGCTGCACT GTAGCGACAG ATGCAGGGAC ATTGCGGCTG ATAAGCGCGG CGCAGTTCTA CATCGCGGAT GGATTCGAGA TGGAATACGC AAGGCTATCT ACGAGCGAGA TGGTTATGTA TGCTGGATCT GCAACAAACT ATGCGACACC AGCGTGGACC CGCAAACTCA CAACGATGCA CCGACTCTTG ATCACATAAT TCCACGATCT AAAGGCGGAA CCCACGAGGA AAGCAACCTA AAGACAGCAC ACCGCATCTG CAATTCTTTG CGCGGCGACG GAGGGGTTGA AGTTCTCTTC TAA
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Protein sequence | MKTCTIQGCE RKHQAKGYCG SHYNQILKPN RHRKEAVACD WCGTTCYKEP SRHNKYQHVY CTLQCRDTHR TALSRLQAGP PLNFLGYWFN CEHCGSEFHT KAINGKYCST PCSSRAHARA RVKTQTEDEW LAFNRKCMEC GQAYRHKRQN RLHCSDRCRD IAADKRGAVL HRGWIRDGIR KAIYERDGYV CWICNKLCDT SVDPQTHNDA PTLDHIIPRS KGGTHEESNL KTAHRICNSL RGDGGVEVLF
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