| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2108 |
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| Symbol | |
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| ID | 8381266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2301108 |
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| End bp | 2302538 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004860 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D- alanine-endopeptidase |
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| Protein accession | YP_003162048 |
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| Protein GI | 256833321 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.173922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGTTAA TGTCAAAAAT CGTCGCAGGG ACGCTCACTG CTGCGCTCCT CGTGACGGGC
GGTTACGTGT GGGCCGATAT CAACGATCTG GTACCCGGTT TCCTCACCAA CGCAGAACCC
ATCCCACCAG CACTCCCCTT CCCCACCGTG ACGGGACCAG ACCCCGCCAC CAGCCCAGCA
GATCCCCTGC CCATTCTTGA CGGGAAAGGC GCCCCCATCA CCGGGGATAC CATCGCAACT
CTTGCTGCGA AGCTCGCTAA GAATAAAGAC ACGTTGGGTC CCTCAGTTGC CGTTGTTGTC
TCCGACACGT TCACTGGTGA CCCCATCACC GCTGTCAACG CAGACACCCC CATTGTTGCT
GCCAGCGTCC AAAAAATCCT CACCGGCCTT GCTGCCATGG ACGTCCTCGA CCCGAACTCC
CGCATCTCCA CCACCGTCGT CCAAGCAGGG AACAACACCT TGTACTTAGT AGGCGGTGGA
GACATGATGC TCGCCGCCAA CACTGGTGAC CCTGACGCGG TCAATGGTCA TGCCGGGATG
CGCAACCTCG CCGAAGACAC CGCAGCGTCG CTGAAACTCA CCGGCCGCAC CACCATCAAC
CTCTACCTTG ACGACTCGCT ATTCACCGGA TCACCCACCG GCCCCTGGGC AGACGACATC
CCCCCATTGG GTTACGCTGC AGCCGTCCAC GCCATCGGTG TCGATGTAGG TCGTCAACGC
GAAGGGACCT ACGCGCCGAG GTACGCAGAC CCTGCAACCC ACGCGCTCAC CACATTTGCT
GACCACCTCA CTGAACTGGG CATCACCGTC ACCAACACCC CCAGTCGCCG TGTCTTAGAC
CGCGATGGGT ATGCCGCCAC AATCGACGAC GAACGTGTCA TTGCCAGTGT GCAATCAGCG
ACCGTCGGGG AAATCGTCGA CTACTTCCTG AAAACCTCTG ACAACACCAT CACTGAAGTC
ATGGGCCGAC TCGTCGCTGT CGAACGCGGA CTACCAGGTA CCTTCGACGG TGCCACCACC
GCCGTGATCC AAGCCCTAAC AACCATGGGA CTCGACACGA CCGGAGTCGA CCTCGTTGAC
TGCTCCGGAC TCGGCGACAC CTCCACAGTC ACCGCAAGCC TCATCAACGA GGCCATCAAC
ACCATGGCCC AAGCCCCCGC CTACCGCCAA GCCGTGCGCG GCATGGCAGT CGCTGCCTAC
GACGGAACCC TCAACGACCG GTACACCAAC CGCAACGGCA GAGGACTTGT CCGCGCCAAA
ACTGGTTCCT TACCCGGAGT GACCGCACTC GCAGGAACTC TTCTCACCCT TGATGACCGC
ACCCTCACCT TCACGATCAT CGCTGACGAC CTCCCCGATG GGGGGCCGTG GGCAGCCCGT
CAGGCAATGG ACGCCTTCGT TGAGCAACTT TCTGAATGCG GGTGCTCATG A
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| Protein sequence | MGLMSKIVAG TLTAALLVTG GYVWADINDL VPGFLTNAEP IPPALPFPTV TGPDPATSPA
DPLPILDGKG APITGDTIAT LAAKLAKNKD TLGPSVAVVV SDTFTGDPIT AVNADTPIVA
ASVQKILTGL AAMDVLDPNS RISTTVVQAG NNTLYLVGGG DMMLAANTGD PDAVNGHAGM
RNLAEDTAAS LKLTGRTTIN LYLDDSLFTG SPTGPWADDI PPLGYAAAVH AIGVDVGRQR
EGTYAPRYAD PATHALTTFA DHLTELGITV TNTPSRRVLD RDGYAATIDD ERVIASVQSA
TVGEIVDYFL KTSDNTITEV MGRLVAVERG LPGTFDGATT AVIQALTTMG LDTTGVDLVD
CSGLGDTSTV TASLINEAIN TMAQAPAYRQ AVRGMAVAAY DGTLNDRYTN RNGRGLVRAK
TGSLPGVTAL AGTLLTLDDR TLTFTIIADD LPDGGPWAAR QAMDAFVEQL SECGCS
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