Gene Jden_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2020 
Symbol 
ID8381179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2210677 
End bp2211162 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID645004772 
Productflagellar hook capping protein 
Protein accessionYP_003161961 
Protein GI256833234 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.292444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG ACACCTCACA AGTCCCGATC ATGCCCACCA CTCCGCAAGC CGGAGTGCAC 
ACAACCCCGG CAGTGACCCG CACCCCCAAA CAGGAAATGG ATGGGGAAAT GTTCCTCAAC
CTGCTGGTCA CGCAACTGAA ATACCAAGAC CCGTCCAGCC CCATGGACAC CACCGAGATG
ATGGCGCAAA CCACGCAACT CGCCTCCATG GAACAGCTCA CCGCGCTGAC TAAGGTCAAC
CAAGAAAGCT TCGCTTTGCA GATGCGCGTC GCATCGGCAG CGTTAATCGG GCAGGACGTC
ACCTTCACCA ACTCCCACGG AGACACCACC ACGGGGCGGG TCGATTCCAT CCGCTACGAC
GGTGAAGTGC CCACCGTCAT CATCGGTGAC GAACACGTGC CGCTCAACTC TATTGCCGGC
ATCACAGCGG TCACCCCAGG TACCACCCCA GACCCATCCA CCCCCAACCA GACCACGCAG
GCCTGA
 
Protein sequence
MTIDTSQVPI MPTTPQAGVH TTPAVTRTPK QEMDGEMFLN LLVTQLKYQD PSSPMDTTEM 
MAQTTQLASM EQLTALTKVN QESFALQMRV ASAALIGQDV TFTNSHGDTT TGRVDSIRYD
GEVPTVIIGD EHVPLNSIAG ITAVTPGTTP DPSTPNQTTQ A