Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2013 |
Symbol | |
ID | 8381172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2205071 |
End bp | 2205850 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645004765 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_003161954 |
Protein GI | 256833227 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACCC TGCAAACATT CCAAGACAGC GCCAACGCCC TCGTTGAACT GATCCCACAC GCAACCCCAC TTCACGCAGC TCTCAGCCCG GTCCCACCGG CTGCCGATGC GACCGAAGGC ATGGTGACTT ACGGTTACCA GCTAGTCGGG TCAACACACT ACGCATTTGG CCTCTACCTC GGCCAAGGCA TCATCGACGC GTTGAGTGAC AGCTCTGAAC AGATCAATAC TCGTGCCGCT GTGCGTCCCG CTCTTGAGGC AGCCGCCCAG CATTTTGGTC AAGGAATCAT CAATGACCTT GACGAGGCGC CATCATTGAC TGAAGGTATT GCCCCGGTGT CTTTCACCCT CAAGTCAGGG GACAGCACAG TTGGGTGGAT CACCTTCCAT AACCGTGAGG ATGTACCCGT GGAGAAACCA TCTCCGGCAG CCTCCGCCCG CACAGCACAA GCAGAGCCAA GCGCACCCAG CCCCACCGAA CCTGAGATCC GCCCCTTCAC CCCACCCATG ATGGGAAGTG GGACAGGGGA TGACAAACTT CGGCTCCTGT ACGACGTCGA AATGACTCTG ACCGTTGAAA TTGGGCGAGC AAAACTCCCC GTACGGCAAG TGCTTGACCT GACCCCCGGT TCCATTGTTG AACTTGACCG AGTCGCGGGT GCACCCGCAG ACCTCCTCGT CAATGGTCAC CTCGTTGCCC GTGGTGAAGT TGTTGTCGTC GACGAAGACT ACGGCCTACG CGTTACAGAA ATCATCGACA CCACAGAGGT CTTCTCCTGA
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Protein sequence | MVTLQTFQDS ANALVELIPH ATPLHAALSP VPPAADATEG MVTYGYQLVG STHYAFGLYL GQGIIDALSD SSEQINTRAA VRPALEAAAQ HFGQGIINDL DEAPSLTEGI APVSFTLKSG DSTVGWITFH NREDVPVEKP SPAASARTAQ AEPSAPSPTE PEIRPFTPPM MGSGTGDDKL RLLYDVEMTL TVEIGRAKLP VRQVLDLTPG SIVELDRVAG APADLLVNGH LVARGEVVVV DEDYGLRVTE IIDTTEVFS
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