| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1962 |
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| Symbol | |
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| ID | 8381122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2154535 |
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| End bp | 2156304 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004714 |
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| Product | ABC transporter related |
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| Protein accession | YP_003161904 |
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| Protein GI | 256833177 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.217672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGTG CTCCACGCCC CCCACGCCCT ATGCCACCCC TTGATGAGTG GTACGACCCA
AACCGGCCAA TGCGCACCCT GGTGCGATTG TTTCGCCCTG AACGGGCCAA ACTGACTGGC
GCTGCTGTTG CGTACGCGTT CAAACACTCA CCGGTGTGGG TGATGCCGCT GCTCACCGCC
ATGATCATTG ACATTGTGGT GGAGCAACGT CCATTGCGTG AACTGTGGGT CGCCACTGCT
GTGCTGGTCG TGATTATCGC GCAAAACCTT CCCGTGTCGA TCCTGTATAT CAAGGCTTTG
TCGCTGTCTG TGCGCAACGT TGAGTCGGGG TTGCGGATGG CATTGGCACG CCGGTTGCAG
GAGTTGTCCA TTGGCTACCA CCGGCGGATG AGTGCTGGCG TGTTGCAAGC CAAGATTGTG
CGTGACGTGG AGAACGTGGT GGAGTCCACG CGCCAAACCT TTGATTCTGC AATGGGTGCG
GTCACCACGA TGCTGGGAGC GCTCATCATC ACCGGGATCC GAACCCCAGA ATTCCTGCCT
ATTTTCTTGT TGGCGGTGCC CGCATCGGCT GTCCTTATTG TGGCGATGCG CAAACGCATG
TCTGCCCGTA ACCGGGCTTT TCGTCACCAC ATTGAATCTA TGTCTGCCCG TGTGTCTGAG
ATGACCCACC TCATCCCCAT CACTCGTGCG CATGCGTTGG AACGCCGTGA ACTGGACCGC
CTCGACTCGA CGTTGGTCTC TGTGCGAGAA GCAGGTATCC GACTCGATGT GTTTAATGGC
CGGTTCGGAG CACTGGCATG GATCACGTTC CAGTTGTTGT CTGTTGCCTG CCTGGTGGGT
GCCGCCTATG CGGCATACAC GGGCTTATTT GGTGTCAGTG CTGGGGACGT CGTCATGTTG
TCCACCTACT TCATGCAACT GACTGGGTCA GTCACAGTGT TGCTCACGTT GACCCCGATG
ATCGCGAAAG GGCTGGAGTC GGTGCGTTCC ATGGGGGAAG TCCTTGTGGC TGACGAACTG
GAACGCAACG AAGGTAAACG CACCGTGGAC AGTGTGGCCG GGGCAGTGTC CTTTGAGAAC
GTGACTTTCC AGTACGACGA CGCTGACGCC CCCGCACTCC AGGACGTGAC CCTGGACGTT
CGCTCCGGTG AAACAGTGGC ATTTGTGGGG CCGTCAGGGT CTGGGAAGTC AACCATCTTG
AACATGGTGA TTGGGTTCCT TGCCCCGACG TCTGGCACCA TTCGCATTGA TGGGAACAGT
GTCAGCGACA TTGATTTGCG CAGTTACCGT CGCTTCATGG CTGTTGTGCC TCAAGAATCT
TTGTTGTTTG AGGGAAGTGT CCGCGACAAC GTCACCTACG GATCGCACGA CCTCAGTGAT
GAGCAGGTGT GGGACGCTTT ACGATCCGCG AATGCTGCGG GGTTCGTGAC TGAGATGGGG
GGCCTCCACG CCGTCATTGG GGAACGTGGT GCTCGCCTCT CGGGTGGTCA ACGCCAGCGC
CTCGCTATTG CCCGAGCCCT CATCCGTAAC CCGCGTATCC TCATCCTTGA TGAAGCAACC
TCCGCGCTGG ATAACGAATC CGAACGACTC GTCCAGCAGG CCCTGGAACG TCTCATGGCG
GGCCGAACCA CCTTCGTTGT GGCGCATCGA CTGTCCACTA TTCGCGGGGC GGATCGGATT
GTTGTCATGC GTGACGGCCA GATCGTGGAA ACCGGGTCGC ACCGTGAGCT TCTCGATGCG
CACGGAGAGT ACGCGGCGAT GCAACGCTGA
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| Protein sequence | MPRAPRPPRP MPPLDEWYDP NRPMRTLVRL FRPERAKLTG AAVAYAFKHS PVWVMPLLTA
MIIDIVVEQR PLRELWVATA VLVVIIAQNL PVSILYIKAL SLSVRNVESG LRMALARRLQ
ELSIGYHRRM SAGVLQAKIV RDVENVVEST RQTFDSAMGA VTTMLGALII TGIRTPEFLP
IFLLAVPASA VLIVAMRKRM SARNRAFRHH IESMSARVSE MTHLIPITRA HALERRELDR
LDSTLVSVRE AGIRLDVFNG RFGALAWITF QLLSVACLVG AAYAAYTGLF GVSAGDVVML
STYFMQLTGS VTVLLTLTPM IAKGLESVRS MGEVLVADEL ERNEGKRTVD SVAGAVSFEN
VTFQYDDADA PALQDVTLDV RSGETVAFVG PSGSGKSTIL NMVIGFLAPT SGTIRIDGNS
VSDIDLRSYR RFMAVVPQES LLFEGSVRDN VTYGSHDLSD EQVWDALRSA NAAGFVTEMG
GLHAVIGERG ARLSGGQRQR LAIARALIRN PRILILDEAT SALDNESERL VQQALERLMA
GRTTFVVAHR LSTIRGADRI VVMRDGQIVE TGSHRELLDA HGEYAAMQR
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