| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1960 |
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| Symbol | |
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| ID | 8381120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2151766 |
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| End bp | 2152860 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004712 |
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| Product | xylose ABC transporter, substrate-binding protein |
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| Protein accession | YP_003161902 |
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| Protein GI | 256833175 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC GGCTCCTCGC GGCACTGACC AGTGTCGCGT TGCTTGCCGT GGTCGCAGCG
TGCAGCACAG CTGACGGCGC GGCCACCACT GCCCGACAAA AAGCCGGCGT TGCGATGCCC
ACGCAGTTAC TCGAGCGGTG GATCCGCGAT AGCCAAGAAG TTGAGGCACA GCTCGAAGCG
CTAGGTTACG ACGTCACGCT GCTCTACGCC GACGATGATG TTCCACTTCA GGTGCAGCAG
GTGGGTCAAC TCATTGACGA GGGGGTTGAA CTCCTCATTA TTGGGGCAGT GGATGGCACC
GCCCTCAAAG ACGAACTCGC ACGTGCGAAG GCCGCAGGGA TTCCTGTCAT TGCCTATGAC
CGCCTCATCC GCGACTCAGA CGCAGTCGAC TACTACGCAA CGTTCGACAA CTACCAAGTT
GGGGTGTTGC AGGGCACTCA CCTCCTTCAA GAGCTTGGTG TCCTTGACTC CAATGGGACT
CCCACAAACA CCGCAGACAC GTTCGCAATT GAGATTTTTG CTGGCTCCCC TGACGACAAC
AACGCCACTG TGTTCTACAC CGCAGCAATG AGTGTTCTGC AGCCCTACAT TGATGCTGGA
ACTCTCGTTG TCCCATCGGG CGAAACTGCC TTCGAAGCAG TTGCTACAGC CGCCTGGGAC
AACAACACCG CTGGCGAACG CATGGCGTCC TTGTTGTCAT CCAACGACAC ACCATTAGAT
GCAGTTCTCT CACCGAACGA TGGGATCGCT CGCGCTGTCC TCGAACAGTC AAAGAGCGCC
GGGTATGGAA CATCCTCACA ACCCCTTCCT GTGGTCACTG GTCAAGACGC TGAAGTTGAC
TCAGTGAAAT CATTGGTCGC AGGCGAGCAA GCATCCACAA TCTACAAGGA CACCCGCCAA
CTTGCTGAGG TTGCCGTTCT GATGGGTCAC TACCTCCTCC AAGGGAAACA ACCTGAGGTC
AACGACACGA CCTCCTACGA CAACGGAACA AAGGTTGTCC CCTCGTATCT TCTGCCACCT
CGACTTGTCA CTGTCGATAA CTACCGTGAG TCGCTCATTG AAACCGGCTA CCTTTCCGAG
GACGAACTGT CATGA
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| Protein sequence | MFKRLLAALT SVALLAVVAA CSTADGAATT ARQKAGVAMP TQLLERWIRD SQEVEAQLEA
LGYDVTLLYA DDDVPLQVQQ VGQLIDEGVE LLIIGAVDGT ALKDELARAK AAGIPVIAYD
RLIRDSDAVD YYATFDNYQV GVLQGTHLLQ ELGVLDSNGT PTNTADTFAI EIFAGSPDDN
NATVFYTAAM SVLQPYIDAG TLVVPSGETA FEAVATAAWD NNTAGERMAS LLSSNDTPLD
AVLSPNDGIA RAVLEQSKSA GYGTSSQPLP VVTGQDAEVD SVKSLVAGEQ ASTIYKDTRQ
LAEVAVLMGH YLLQGKQPEV NDTTSYDNGT KVVPSYLLPP RLVTVDNYRE SLIETGYLSE
DELS
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