Gene Jden_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1929 
Symbol 
ID8381092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2114036 
End bp2114851 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content58% 
IMG OID645004683 
ProductABC transporter related 
Protein accessionYP_003161874 
Protein GI256833147 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTG ATTCTGTCCC GATTGTGGCT GGTCTTGGTC ATGATGTTCC GGTTCTTGAA 
CTGCGCGGGG TTACTCGTTC TTTCTCGAGC CGTACGCGAA CAACAGTGGC GCTTGATCAG
GTGAACCTTG CTGTGTATTC CGGTTCCTCG GTGGGCATTG TGGGGGAATC AGGGGCGGGG
AAATCCACAA TCCTCAAGTT GCTCATGGGG TTAGATACCC CGACATCGGG TGAGGTTCGC
TTTCGGGGAC AGGTGGTGAA TCGGCGCGAC CGCGCTCAGA TGACAGAGTT CCGTCGTGCT
GTGCAGATTG TGTTTCAGGA CCCGCGCTCC TCACTTGACC CGCGCATGAC GGTGGCACGC
ATCATTGCGG AACCTTTGAG GTCGCTGGGA ATTCCGGGAA ACCACCGTGA TCGTGTCCGC
GAGGTTCTCG CCCTGGTTGG GCTTGATGAG TCAGTTGAGA ACAAGTATCC AGCTCAGTTT
TCTGGGGGGC AGCGCCAGCG TATTGCGATT GCGCGTGCAC TTGCGCCGTC ACCGTCTGTT
CTTGTGGCCG ATGAACCGGT GAGCGCATTG GATGTGTCGG TGCGTTCACA CATTGTTGAT
GTCCTTGCTG ATCTCACTGA CCGGTTGGGG GTGACGCTTG TGATGGTGTC TCACGACATT
GCGATAGTGG GGCAGTTGTG TGACCGGACG GTGGTTCTTC GGCATGGTCG AATTGAGGAG
GAAGGGGAGA CGGCGCGGGT GCTCACGAAG CCGCAAGCAC AGTACACGCG CACACTTCTC
GATGCGGTGC CTCAGATGCC GGGTGCCCTC GACTGA
 
Protein sequence
MTSDSVPIVA GLGHDVPVLE LRGVTRSFSS RTRTTVALDQ VNLAVYSGSS VGIVGESGAG 
KSTILKLLMG LDTPTSGEVR FRGQVVNRRD RAQMTEFRRA VQIVFQDPRS SLDPRMTVAR
IIAEPLRSLG IPGNHRDRVR EVLALVGLDE SVENKYPAQF SGGQRQRIAI ARALAPSPSV
LVADEPVSAL DVSVRSHIVD VLADLTDRLG VTLVMVSHDI AIVGQLCDRT VVLRHGRIEE
EGETARVLTK PQAQYTRTLL DAVPQMPGAL D