Gene Jden_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1868 
Symbol 
ID8381032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2045976 
End bp2046935 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content58% 
IMG OID645004622 
ProductTriacylglycerol lipase 
Protein accessionYP_003161814 
Protein GI256833087 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.021332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0911205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCATCG TGAGGCACCG TTTCTTTCTC CACTATGTGA GAACACACAA ATCAGGCGTC 
ATAGTGCGCC TCCGTGTGCT CCCCACACCG ATCCGAAAGG ACACTCACGT GAGACGAATC
CTGGCTCTTT GTGTCACTCT GGCGCTCCTG GTCATTCCTA CTGGCAGCGT CGCTCATGCG
GCGGACACCC CCTACGAACG TGGCCCTAAC CCAAGCGAAT CCTTGATCGA ACAACGACGT
GGAAATTACG ACATCGCACA ACGGTCAATC AGCCGCTTCA GTTCAGATGG ATTCCGCAAC
GGAACGATCT ATTACCCGAC AGACACATCG GACGGAAAAT TCGGCGTGAT CGCTATCTCC
CCGGGATACA CCGCTGGGGA ATCGAGCATC GCCTGGCTCG GTTCACGCAT CGCCTCGTTC
GGATTTGTTG TGGTCACCAT CAACACCACC ACCCGCTATG ACCAGCCGCG CCAACGCTCT
ACCCAACTGC TTGCGGCCCT CGATCACGCC ATGAACGACT CAGTTGTAGG GCCACTGATT
GACCCAGAAC GACAAGCCGT GATGGGTCAC TCCATGGGTG GGGGCGGCGC ACTCCAGGCC
GCTGAAAGCC GCCCAGAGAT CGATGCTGTT GTTGCCTTGA CGCCATGGAA CCTGAAGAAG
AATTGGGATG GCGTCGATGC TGCGACGCTC ATCATCGGTG CTGAACGCGA TACCGTCGCG
TCAGTCCGCA CCCATTCCAT CCCGTTCTAT GAGTCCCTCA CTCAGGCGGA ACAACGTGGC
TACCTTGAAC TCCGTGGCGC AAGCCACTTT GCTCCGAACG TCAGCAACAC CACAATTGCG
AAGTACAGTA TCGCCTGGAT GAAGCGATAC CTGGACAACG ATGATCGCTA TGACCAGTTC
CTCAACCCTG GGCCCGCGGT GGGATACGCC TCAGGCGTGT CCGACTACCG GCTGCAATAG
 
Protein sequence
MPIVRHRFFL HYVRTHKSGV IVRLRVLPTP IRKDTHVRRI LALCVTLALL VIPTGSVAHA 
ADTPYERGPN PSESLIEQRR GNYDIAQRSI SRFSSDGFRN GTIYYPTDTS DGKFGVIAIS
PGYTAGESSI AWLGSRIASF GFVVVTINTT TRYDQPRQRS TQLLAALDHA MNDSVVGPLI
DPERQAVMGH SMGGGGALQA AESRPEIDAV VALTPWNLKK NWDGVDAATL IIGAERDTVA
SVRTHSIPFY ESLTQAEQRG YLELRGASHF APNVSNTTIA KYSIAWMKRY LDNDDRYDQF
LNPGPAVGYA SGVSDYRLQ