Gene Jden_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1859 
Symbol 
ID8381023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2033406 
End bp2035277 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content62% 
IMG OID645004613 
Producthypothetical protein 
Protein accessionYP_003161805 
Protein GI256833078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.163853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0142355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGTGC GTAGTCAGGA CGATATTGAT CGCCGCCGGG CGCGCCGGGG AACGGTGTCG 
AGTGTGCTTG CTGCGCTTGT TGTGGTGGGT GCGAGTGCGG CGTTGGTGGT GGCGCCGTTG
GATGGGGTGT CGGCACGGCG TCCTGATGTT GCCCGAGGGT TGACTCAGGT GGATATTGGT
TCGCCGTCGT CGATGGTGGT GTGTCCTGAG CCGGTGCGGT TGACTCAGCA GCAGTCGGTG
ATGGTTGATG ACACGTTGGC GGAGCAGCAA GTGTCCTCCT CGCGGCAGGT TCGGTTGGGT
GTTTTGGGTC GTGGGGGTGG GGTGGCTGTG AGTGGTTTGG TCCCTCGTGG TGGGGTGGAC
GATGATTCAG GTTCGGCGCA AGTCGCGGGT GCGCCGTCGT TGACTGCGCA CGACGTTGAC
GCTCCGGCTG TGCGTGATTT CCCTGGGATT GCTGATGCGC TGGTGGCTGT GACGTCGGGC
CGGGGGGTTG CGCAGAGTGC TGAGGGGCAG TGGACTGCTG CGTCGGTGTT GACCTCGGTC
GATGGTGGGG ATCGACGTGG GACAGTGGGG GCGCCGTGTC AGGTGGCGTC GAGTGAGCAG
TGGCTTGTGG GTGGCTCAAC TCAGTTGGGT GCGAGTTCTG CGTTGCGGGT GATGAATCCG
TCGGTGACTG CTGCGACGGT TACTGTCACC ATGTGGGGGC CTTCTGGCCG GGTGGGGTTG
CCGGGGGCGG AGTCGTTGTT GGTGCCGCCT GGGGAGCAGG TTGAGGTGTT GCTTGAGGGT
GTTGCTGCGC AGCAGCGTCG TGTGGCGGTT CATGTGGCGG CTGCGGGCGC GTTGGTGACT
GCGGTGATTG AGCATTCAGA GTTGGATGGG ATCACATCGC TTGGTGGTGA TCTTGTTGTT
CCGGGTGCGT CGCCGCAGCA GGTCCAGGTG GTCCCTGGGG TGGTGGTTCG TGATCGTGTT
GACGATGCGG AACGTGCATC GGTGGTGCGT GTTGTTGCTC CCGATTTTTC GCCGGTGGCT
TCTCTTGCGC AGGCTTCTGA AGAAGATGCG GCTCAGGTGG CTGGTGACGT TGTGGGGCAG
GTGCGGGTGA CTCTTCTTGG TCCTGATGGG CATGTGGTGT TGTTGGGTGC GACTGCCCAT
GATCTTGTTG CTGGTCAGGT GATTGATGTG CCGTTGACGG GTGTCCCTGC TGGGGAGTAT
TCGGTTGTTG TGGATGCGGA TGTGCCTGTC CTTGCGGGGG CACGGGTTAA TGATCAAGCT
CCTGATGATG TCGGTAGTCG TTTCGGCACG CCGTCTGATT TTGCGTGGGT TCCTGCTGCG
GTGGGTACAG TGTCGGCGGA GAGTTCGGTG GGTGTTCCGT TTGTGTCGGC GACGTCAGCG
GTTGTTCTTC CTCTGGGGGT GGATGCGACG TTGGTGGCTA CTCGTCTTCC AGGGGGGAGT
ACGCAGGCGG AGGTGGTGTC AGAGCTTGAT GCGGTTCCGA ATGTGTATGC GAGTGACGAG
TCGGGTGAGG GTGACAAGCA GGGGGATTCG TGGACTGAGG AGGAACAGAC TGCGCGTGAG
GCGTGGGTGG TTGCTTCTGA GGCGGTCGCT GATGTGCTTG TGTTTGATGA GCAGGGCGGG
CAGTTGACGC AGCGGACGTT GACGTTGTCT GTTGGGCAAA CGAATTCTCT TAATATGGGT
GAGTTTTCTG GTGCGAGCGC GGTGGTGGTT GTGCCTCGTG ATGGCCACGA TGGTGTGGTG
TCGTGGTCGG TGGTGACTGC GGATCCTGAG ATTCCTGGGT CGTTGAGTGT GTTTGCGCCG
CATGTGAGTG CGGCGGACGC GCCGTTTGTG ACGGTGGAGC GTTCGGTGCG GGCGGGGCTA
CCGACCGAGT AA
 
Protein sequence
MGVRSQDDID RRRARRGTVS SVLAALVVVG ASAALVVAPL DGVSARRPDV ARGLTQVDIG 
SPSSMVVCPE PVRLTQQQSV MVDDTLAEQQ VSSSRQVRLG VLGRGGGVAV SGLVPRGGVD
DDSGSAQVAG APSLTAHDVD APAVRDFPGI ADALVAVTSG RGVAQSAEGQ WTAASVLTSV
DGGDRRGTVG APCQVASSEQ WLVGGSTQLG ASSALRVMNP SVTAATVTVT MWGPSGRVGL
PGAESLLVPP GEQVEVLLEG VAAQQRRVAV HVAAAGALVT AVIEHSELDG ITSLGGDLVV
PGASPQQVQV VPGVVVRDRV DDAERASVVR VVAPDFSPVA SLAQASEEDA AQVAGDVVGQ
VRVTLLGPDG HVVLLGATAH DLVAGQVIDV PLTGVPAGEY SVVVDADVPV LAGARVNDQA
PDDVGSRFGT PSDFAWVPAA VGTVSAESSV GVPFVSATSA VVLPLGVDAT LVATRLPGGS
TQAEVVSELD AVPNVYASDE SGEGDKQGDS WTEEEQTARE AWVVASEAVA DVLVFDEQGG
QLTQRTLTLS VGQTNSLNMG EFSGASAVVV VPRDGHDGVV SWSVVTADPE IPGSLSVFAP
HVSAADAPFV TVERSVRAGL PTE