| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1845 |
|---|
| Symbol | |
|---|
| ID | 8381009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2018254 |
|---|
| End bp | 2019120 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645004599 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003161791 |
|---|
| Protein GI | 256833064 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.507693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.194612 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTAGTA ACGCAACAGT CCTCGACGAC GAATTCGACT ACGAAATCGA CCCAGAAGAC
CTCCCACAAG GCACACCAGA AAAAGGCGAA CTCGGTGACC CATCCGTCAT CGTCGACGGA
CTCCACGTGA CCTACCGTGT TGTCGGGTCA AAAAAACGTG GAGCTGTGAC CCCACACAAA
GACTCGATAC TGCGCAAGTT CCTCCGAAAA GGAGGAGCAC TCACCGGAGG CTACACCGAA
GTCAAAGCAG TGAAAGGCGT CAGCTTCACC GCCCACCACG GAGAGTCCAT CGGAGTCATC
GGAACCAACG GTTCTGGAAA ATCCACACTC CTCAAAGCAA TCGCTGGTCT CCTTGCCCCC
AGCCAAGGGG AAATCTACGT GTCCGGTATC CCCTCACTAC TCGGTGTGAG CGCAGTACTC
ATGAAAGACC TCACCGGGGA GCGAAACATC ATGATCGGTG GGCTGGCACT AGGCCTCACC
AGAAAAGAAG TGGAAGAACG CTTCGATGAA ATCGTGGACT TCTCCGGGCT CGGAGACGCA
ATCTATCTCC CCATGAAAAC CTACTCCGCT GGGATGGGGG CACGGCTCCG TTTTGCCATA
TCCACAGCCG CGACACCAGA CGTCCTCATG ATCGACGAAG CACTCGCCAC CGGAGACGCA
GGTTTCCGAG AACGAAGCAG GCAGCGCATC GACGAAATCC GGGAGCACGC TGGTACCGTA
TTTATCGTTG CCCACTCCCT CGCCACCATC AAAGCGATGT GCACCCGCGT GATCTGGATG
GACCAAGGAA TCATCCGAAT GGATGGCGAC CCCGACGAAG TCACCGCAGC CTACCGCCGC
TACACGAAGG AAAACGCTCG TAAATGA
|
|---|
| Protein sequence | MTSNATVLDD EFDYEIDPED LPQGTPEKGE LGDPSVIVDG LHVTYRVVGS KKRGAVTPHK
DSILRKFLRK GGALTGGYTE VKAVKGVSFT AHHGESIGVI GTNGSGKSTL LKAIAGLLAP
SQGEIYVSGI PSLLGVSAVL MKDLTGERNI MIGGLALGLT RKEVEERFDE IVDFSGLGDA
IYLPMKTYSA GMGARLRFAI STAATPDVLM IDEALATGDA GFRERSRQRI DEIREHAGTV
FIVAHSLATI KAMCTRVIWM DQGIIRMDGD PDEVTAAYRR YTKENARK
|
|---|
| |