Gene Jden_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1785 
Symbol 
ID8380949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1947022 
End bp1948107 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content59% 
IMG OID645004538 
Productpeptide chain release factor 1 
Protein accessionYP_003161731 
Protein GI256833004 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.19209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATA CATTTGCTGC CGTTGAACCC CTCCTGGGCG AATACGCTGA CATTGAAGCG 
CAACTCTCCG ACGCCTCAGT GCACTCTGAT CAGGCGCGCG CACGGCAACT GGGCCGCCGC
TACGCCGAAC TGGGGCAAGT CGTTTCCGCC TACCGGGCAT GGCGTTCAGC AACGGATGAC
CTTGACGCCG CACGCGACAT GGCAGAAGAG GACCCCTCAT TCGCTGAGGA AATCCCCGCC
ATGGAACACG CCGCAGCCGA AGCAAGCGAA CGACTACGCC GGGTCCTCAT CCCCCGCGAC
CCCGATGATT CTCGTGACGT CATCCTCGAG ATCAAAGCAG GGGAGGGCGG CGCGGAATCT
GCCCTATTCG CTGCGGACTT ACTCCGAATG TACTTACGCT ACGCTGAACG CCAAGGGTGG
CGGACCGAAA TCATTGGCGC CACAGAATCC GACCTCGGTG GCTACAAAGA CGTGCAAGTC
GCCGTGAAGG CGCGAGGCCA AGTGACACCA GAAGAAGGCG TGTGGGCGCA TCTGAAATAT
GAAGGTGGTG TCCACCGGGT GCAGCGCGTC CCAGTTACTG AATCGCAAGG ACGTATCCAC
ACGTCGGCTG TTGGTGTCCT CGTTTTCCCC GAAGTGGAAG ACGAAGGCGA ACTGGAGATT
GACCAAAACG ATCTTCGTAT CGACGTGTAC CGGTCCTCAG GGCCCGGCGG TCAGTCGGTG
AACACGACAG ACTCAGCTGT CCGCATCACC CACATTCCTA CGGGGATTGT TGTGTCTATG
CAAAACGAAA AATCCCAACT ACAAAACCGG GAACAAGCGA TGCGCGTGTT ACGTGCCCGC
CTACTGGCGG CACGACAAGA AGAAGCCGCA GCCGCAGCGC AGGATATGCG TCGTTCCCAA
GTACGCACCG TGGACCGATC CGAACGAATC AGAACCTATA ACTTCCCGGA AAACCGCATC
GCGGATCACC GTACCGGGTT CAAGTCCTAC AACCTTGATC AGGTACTTGA TGGGGACGTT
CAACCCGTCG TGCAGTCAGC CATTGACGCC GATGAAGCGG CGCGCCTCGC CGCAGCGGGG
GAGTAG
 
Protein sequence
MSNTFAAVEP LLGEYADIEA QLSDASVHSD QARARQLGRR YAELGQVVSA YRAWRSATDD 
LDAARDMAEE DPSFAEEIPA MEHAAAEASE RLRRVLIPRD PDDSRDVILE IKAGEGGAES
ALFAADLLRM YLRYAERQGW RTEIIGATES DLGGYKDVQV AVKARGQVTP EEGVWAHLKY
EGGVHRVQRV PVTESQGRIH TSAVGVLVFP EVEDEGELEI DQNDLRIDVY RSSGPGGQSV
NTTDSAVRIT HIPTGIVVSM QNEKSQLQNR EQAMRVLRAR LLAARQEEAA AAAQDMRRSQ
VRTVDRSERI RTYNFPENRI ADHRTGFKSY NLDQVLDGDV QPVVQSAIDA DEAARLAAAG
E