| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1721 |
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| Symbol | mnmA |
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| ID | 8380888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1866448 |
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| End bp | 1867719 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004477 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_003161670 |
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| Protein GI | 256832943 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.57912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTAC TCGCCGCCAT GTCAGGTGGA GTTGACTCTG CCGTTGCAGC GGCCTTGGCA
GTGGAGGCCG GCCACGACGT TGTCGGTGTC CACATGGCGT TGTCGCGTAA CCGTAACCAG
TTCCGGTCAG GCTCGCGTGG CTGCTGTTCC ATTGAGGACG CCTCTGATGC CCGCCGTGCA
GCCGACATTT TAGGCATCCC CTATTACGTG TGGGATTTGT CGGAAAAGTT TGAAGACACC
GTTGTTGCCG ACTTCATTTC CGAATACGAG GCTGGACGCA CCCCGAACCC GTGTGTGCGC
TGCAATGAGC ACATCAAGTT TGAAGCACTG CTCGATAAAG CGATGGCACT AGGGTTTGAT
GCGGTTGCTA CCGGACACTA CGCTCAGATC ATTGACCGTG ACACCACCGA TGTGCACGGA
CAACCCACGG TGATCCGCGA ACTGCACCGT TCCCCCAACG ACGCCAAAGA CCAGTCGTAT
GTGCTCGCTG TGATGGGGCC AGACCGGCTG AAGAACGCGA TTTTCCCGCT CGGGGGGTAC
GCCTCAAAAG ACGAGGTCCG TGCAGAAGCA GAACGCCGCG GCCTGAGCGT GTCAAACAAA
CCAGATTCAT ACGACATCTG CTTCGTCGCA GACGGTGACA CCAAAGGATT CCTGCGCGAC
CGATTGGGGT CACGCCCAGG TGAGGTCCTA GACACGGACG GCAACGTCGT CGGAACTCAC
GACGGCGCCT ACGCCTACAC GGTCGGTCAA CGCAAAGGAC TCGCCCTCGG ACGCCCCGCT
GAAGACGGCA AACCCCGCTA CGTCCTTGGA GTCAGCACCC GCGACAACAC CGTGATCGTT
GGTCCATCCG AACTGCTGTC CGTGAACCGG ATTGTGGGTG ACAAAGCAGT CTGGTTCGCC
ACCGACATTC TCACCGATGC GTCCCTGACC ACCGAAGGCA GTGACTGGTT TGCAATCGAA
GGGCAAGTGC GCGCCCATGG CGCGGCGCTG CCCGGTCGCG CTCGCATTGT TCCCCTTGAC
CGTGCGCGTG ACCTTATGCC AGCGGGCCGC GAAGAACTCG CAGCCGAGTG CACCCGTGTT
GAGGGCGCAG ACCCTGGCCA CGACCACACT GCCCTGGTCG AAGTGGAACT TCAATCCCCG
TTGCGCGGAG TCGCAGCAGG ACAATCCATT GTCTTGTACC GCGGGACCCG AGTCATTGGG
CAAGCAACCG TGGTCGCCTC TGACCGCAAA GCCACACTCC CCACCCCCCA ACGAGCCGCC
GCCACCGCAT GA
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| Protein sequence | MRVLAAMSGG VDSAVAAALA VEAGHDVVGV HMALSRNRNQ FRSGSRGCCS IEDASDARRA
ADILGIPYYV WDLSEKFEDT VVADFISEYE AGRTPNPCVR CNEHIKFEAL LDKAMALGFD
AVATGHYAQI IDRDTTDVHG QPTVIRELHR SPNDAKDQSY VLAVMGPDRL KNAIFPLGGY
ASKDEVRAEA ERRGLSVSNK PDSYDICFVA DGDTKGFLRD RLGSRPGEVL DTDGNVVGTH
DGAYAYTVGQ RKGLALGRPA EDGKPRYVLG VSTRDNTVIV GPSELLSVNR IVGDKAVWFA
TDILTDASLT TEGSDWFAIE GQVRAHGAAL PGRARIVPLD RARDLMPAGR EELAAECTRV
EGADPGHDHT ALVEVELQSP LRGVAAGQSI VLYRGTRVIG QATVVASDRK ATLPTPQRAA
ATA
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