| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1561 |
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| Symbol | |
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| ID | 8380730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1677444 |
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| End bp | 1679924 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645004311 |
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| Product | ComEC/Rec2-related protein |
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| Protein accession | YP_003161512 |
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| Protein GI | 256832785 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.16578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGTTC GAGACCTACG GCTCGTCCCC CTCGCTCTCC TCACCTGGAT CGCGGTTGCC
TGTGCCCGAC TATCACTATC GTGGGCTCTC GGCGTCCTCG CGCTCCTTAT GATCGGTGCT
GCGGTGGGCG TCATTGCAGG GTTACGGCAT TCCCCACGCC CCACTGCATG GGCCACAGGC
CTTGTACTGG CCGCCCTCAT TTCTTCATTC GCTGTCACAC ACATGGTCAT CCTGCACCAA
CGAACACACC ACGCCCAATG GCCGCAAGCT GTGACAACAA CAGCCGAGGT GTGCATCAAC
GGCACAGTTG CCACAGCATC ACAGCCCACC TCACAGTCAA CACCTGACCA GCCACGATGG
TACACAGACC TCGTTGTTGA CACCCTGACC GTGATGATCA TTCACGACGC TCCCCTGGAA
CGAGGAGATC GCATCACAGC CTGTGGAACA ACACGCGAAG CACCTCGAAC AAGCCACCGT
GTTGCTCTAC TCGATACCCA CACAATCACC ACCCACGCAC ACCCCACCGG TCCAACCGCC
TGGTCCAACA CCGTGCGGCG TCACACCATG GACCTTGCCG CCACGCTTGA ACCCCAAGCA
CAAGGACTTG TCCCAGGAAC CGCAATCGGC GACACCACCC TCATGCCACC ACACCTCGAC
GACGCCATGA AAGCAACCAG CCTCACCCAC ATCACCGCAG TCTCTGGATC CCACTTTTCC
CTGGTGTTCC TCATGGTCCT CACCCTGGCA GCGCCCCTAC CCCGATGGGC CAAAGCAATC
GTCGCGTCAG TAGCGATGGC CCTGTTCGTG ATTCTCGTTC ACCCCCAACC AAGCGTCCTT
AGAGCAGCAA CAATGGCTGC GATCGCCGTT CTCGCGATTA TTATCCGCCG CCCACCGCAA
GGGCTCACCT CCCTGTCCTG GGCAGTGATC CTTCTCGTGA CCGCCAACCC CTACCTCACC
ACCCATCTCG GATTCGTTTT GTCCGTTGCC GCAACCGCAG GGCTCGTCGT GGGAACCACC
CCCATCGCCA CAGCCCTGCA CCGGCCCTCA CAACCACGCC GATGGATGCC AGAACCGCTC
GCCTACGCGC TCGCGGTCCC CACCGCGGCC TGGATGGCGT GCACCCCCAT CCTCATCATC
CTTGACCCCT CTATCTCTGT GATTTCTGTT CTTGCGAATA CGCTGGCGGC CCCAGCTCTT
GCGCCGGCGA CGATCATCTC GCTGCTGGGG GCACTCATTG CACCATGGGC GCCGCCTGTT
GCACTGGCCC TTTTCCACGT GGCGAGCATC GCGACCTCGT GGATTTCCTA TGTTGCTGTC
ACCTGCGCGC AGCTTCCCTT TGCGCGCCTA CCGTGGTGGG AAGGGCCACA AGGTGTCTGT
GCCGCAGCAC TTGCCATGCT TGCTTTCGCC TCCGTGCTCA GTCTCTTTCA TCCTGATGCC
CGAGCGTGGT GGGGCACGAC TATCCACTCA GTGCAACGCC GCACAATTAT GCAGGTGGCC
GCTTTAATCA CTACTGCGCG CGATACCCAG TTCTTTCCTC CGCGCGGTAG CGCACCGACG
ATCACACCAC CAGCCGTACT GCGCAGATGT GCACTGATCC TCCTGTGCAC CCTGGTCATT
GTGGTGATCC GACCGACGTG GCTGACTTAT TGGTGGCCCA CAACCGACCA GTGGACTCTC
ATTGCCTGTG ACGTTGGGCA AGGTGACGCT TTCCTCGTCA AAGACCCAAC CGGGCACATC
ATCATGGTTG ACGTGGGACC ACCGAACAGC GGGATCACCC GGTGTCTGAA CAAAGCCGGG
GTGGCACGCA TCGACACGCT CATCATTTCT CATGCTCACG CAGATCATCA AGGTGCACTA
CCTGAGGTGT TGAACGCCGT CGACGTGGGA GCTGTGCATG TTTCGCAGCG GTACAGTGAC
GACTCGGATG ACCGCGCACT TCTCGACCAA CACACGGGCG GAAGGACCCG CATCATCAGC
CATAGTGCAG GGGAGCGTGT GCTGTTGTCA CCTACCACGA CGATGAATAT TTTGTGGCCA
ATGCCTCCAG CCCGAGTTTC TGCACCCTCC CGTGATAGTG ATCCACGTAA TAACGATTCG
TTGGTCGTGC AACTTACTGT CACTGGCCCC AATGAGCCGC TCACGCTGAC CTTTCTTGGT
GATCTTGAGG AAGATGCGCA GGACAAGCTC GCGCACGCCC TCATCAGCCA ACAGGATCCC
TCACCTCCTG GGTGGCACAT CGTCAAGCTG GCGCACCACG GCTCACGAAG CCAAAGTGAG
ATGCTCGCCG CCGTTCTTGC GCCAGATCTT GTTGTTGTTG GTGTGGGGGC ACACAACACC
TACGGCCACC CTCACGCTGA TGCGCTCGAC TTGTACCGTG GTGCTGCCAT CATGCGCACC
GACATCTGCC ACACTTTTGA CGTGAGCGTC ACACGCGGGG TACTCGCTTC CCACATGTGT
TCACCGCAGA AGGAACAATG A
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| Protein sequence | MKVRDLRLVP LALLTWIAVA CARLSLSWAL GVLALLMIGA AVGVIAGLRH SPRPTAWATG
LVLAALISSF AVTHMVILHQ RTHHAQWPQA VTTTAEVCIN GTVATASQPT SQSTPDQPRW
YTDLVVDTLT VMIIHDAPLE RGDRITACGT TREAPRTSHR VALLDTHTIT THAHPTGPTA
WSNTVRRHTM DLAATLEPQA QGLVPGTAIG DTTLMPPHLD DAMKATSLTH ITAVSGSHFS
LVFLMVLTLA APLPRWAKAI VASVAMALFV ILVHPQPSVL RAATMAAIAV LAIIIRRPPQ
GLTSLSWAVI LLVTANPYLT THLGFVLSVA ATAGLVVGTT PIATALHRPS QPRRWMPEPL
AYALAVPTAA WMACTPILII LDPSISVISV LANTLAAPAL APATIISLLG ALIAPWAPPV
ALALFHVASI ATSWISYVAV TCAQLPFARL PWWEGPQGVC AAALAMLAFA SVLSLFHPDA
RAWWGTTIHS VQRRTIMQVA ALITTARDTQ FFPPRGSAPT ITPPAVLRRC ALILLCTLVI
VVIRPTWLTY WWPTTDQWTL IACDVGQGDA FLVKDPTGHI IMVDVGPPNS GITRCLNKAG
VARIDTLIIS HAHADHQGAL PEVLNAVDVG AVHVSQRYSD DSDDRALLDQ HTGGRTRIIS
HSAGERVLLS PTTTMNILWP MPPARVSAPS RDSDPRNNDS LVVQLTVTGP NEPLTLTFLG
DLEEDAQDKL AHALISQQDP SPPGWHIVKL AHHGSRSQSE MLAAVLAPDL VVVGVGAHNT
YGHPHADALD LYRGAAIMRT DICHTFDVSV TRGVLASHMC SPQKEQ
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