| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1529 |
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| Symbol | |
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| ID | 8380698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1644282 |
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| End bp | 1646063 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004279 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003161480 |
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| Protein GI | 256832753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.331611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.956497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCTGA CCCTGACAAC CACGTCACCT GACGTCCAGA TCCTCCATTC CGCCCACGAA
GGTGAAGCAG AATGGTGGCG CAGCGCCGTC ATCTACCAGG TGTATCCACG GTCTTTTGCA
GACGCAAATG GCGATGGAAT CGGCGACCTC CAAGGCATCA CCCAACGCCT TGACCACCTC
AAAGACCTCG GGGTTGATGC GCTGTGGCTG TCACCGTTTT ACAAGTCACC ACAAGCTGAC
GCCGGGTACG ACGTAGCCGA CTACCGCCAA ATCGACCCAA TCTTCGGTGA TCTGGACGAC
TTCGAAGCGA TGGCCGCCAA AGCACGCACG CTTGGGTTGC GGGTCATCGT TGACCTTGTT
CCTAACCACA CCAGTGACGA TCACGTCTGG TTCCGTGAAG CTCTCGCCGC AGGGCCTGGT
TCTCCAGCAC GCGACCGGTA CATGTTCCGA GATGGCCGTG GTGAGAATGG GGAACTTCCA
CCCAATAACT GGAAGTCAAT TTTTGGTGGT CCCGCCTGGA CCCGCGTAGA CCAGCGCTGG
GACGCTGACA AAGATGGAAT CAGCGACACT CAGTGGTACC TGCACATGTT CGATACCCGT
CAACCAGACC TCAACTGGGA CAACCAGGAA GTAAAAGAAG ACTTCCACGA CATTCTGCGC
TTCTGGCTTG ACCGAGGAGT CGACGGATTC CGCATCGATG TTGCACACGG CATGGTGAAA
GCACCCGGCC TTCCCGACTG GGATGGTGTG ACCAACATGG TCGAGGGGTC AACGACCGAT
GGTGCAACTC AAATCAAAAC CGACGGCACC CCCGATGAAG ACGGCTCAAA TGGTGGCGGA
AACTCCGGCC CAATGTTTGA CCAGGATGGC GTCCACGAAA TTTACCGTTC GTGGCGTCGC
GTCCTGAACC AGTATGACGG TGACCGGGCG TTGGTCGCCG AAGCCTGGGT CGAGCCCTTG
TCCCGCCTCG CGCTGTACGT GCGTGACGAC GAAATGCAGC AGGCTTTCAA CTTCTCCTAC
CTCACCACCA AGTGGGATGC CGCTGCTTTG CGCACAGTGA TCAACGCATC GATCCGTGAA
AATGACAAAG TTGGGGCTCC CACCACCTGG GTGCTGTCCA ACCACGACGT TGTCCGACAC
GCCTCACGCA TGGGGCTCGT CGGCGGAGAG CTCAACCCGA ACGGTATTGG CCCCAACGAC
CCACAACCTG ACGCAGCCCT CGGGCTACGC CGGGCACGTG CCGCTACCCT CCTCATGCTT
GCTCTTCCCG GCTCAGCTTA CTTGTACCAA GGAGAGGAAT TCGGTCTTCC CGACCACACC
ACGTTGGAAC CCCAGTACCG CCAAGATCCC GCTTGGGAAC GCAAGGGGCA CACCGAGGCC
GGTCGTGACG GCTGCCGAGT CCCGCTGCCA TGGGAAGCTG ACGCGCCAGC GTATGGGTTC
TCCCCGACAG GTCAGTCCTG GCTCCCCCAG CCAGACACGT ATCGAGCGTG CGCAGCGGAC
GTCCAAAAGG CCGCACCCGA CTCGACTTAT GCGATGTACA ACAAGGCGCT GACGTTGCGG
AAGAAATTCG GTATCGGCCT TGGCTCGTTG GCCTGGTTAA GCGAGTTTGT GCACACCGGT
GAGGTGCTCG CGTTCGAGAA CAACGGGGTC ATTTGCATCG CCAATATTGG TGGGGACGCA
GTTGAACTCC CTGAAGGAAC AGAGATTCTT ATCTCCAGTG CACCTATGCA CTCTGCCCTC
ACGATCGAAC GTGACACCTG TGTGTGGATT CGCCGTCGAT AA
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| Protein sequence | MALTLTTTSP DVQILHSAHE GEAEWWRSAV IYQVYPRSFA DANGDGIGDL QGITQRLDHL
KDLGVDALWL SPFYKSPQAD AGYDVADYRQ IDPIFGDLDD FEAMAAKART LGLRVIVDLV
PNHTSDDHVW FREALAAGPG SPARDRYMFR DGRGENGELP PNNWKSIFGG PAWTRVDQRW
DADKDGISDT QWYLHMFDTR QPDLNWDNQE VKEDFHDILR FWLDRGVDGF RIDVAHGMVK
APGLPDWDGV TNMVEGSTTD GATQIKTDGT PDEDGSNGGG NSGPMFDQDG VHEIYRSWRR
VLNQYDGDRA LVAEAWVEPL SRLALYVRDD EMQQAFNFSY LTTKWDAAAL RTVINASIRE
NDKVGAPTTW VLSNHDVVRH ASRMGLVGGE LNPNGIGPND PQPDAALGLR RARAATLLML
ALPGSAYLYQ GEEFGLPDHT TLEPQYRQDP AWERKGHTEA GRDGCRVPLP WEADAPAYGF
SPTGQSWLPQ PDTYRACAAD VQKAAPDSTY AMYNKALTLR KKFGIGLGSL AWLSEFVHTG
EVLAFENNGV ICIANIGGDA VELPEGTEIL ISSAPMHSAL TIERDTCVWI RRR
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