| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1524 |
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| Symbol | |
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| ID | 8380693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1637010 |
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| End bp | 1638914 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004274 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003161475 |
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| Protein GI | 256832748 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.383652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCT CACCTGGGTC GATTCCTGCT GTGTATCTTG TTCCCCACCA TGATGGGTCT
GCGCTCTACG TTGAGAAGCT GACCCCGTTG TTGGGGGAGG AGGTGCGCGT ACGACTGCGG
GTGCCGGCGG GCATCAATGC CCGTGAGGTA CACGTGCGGA TGGTCCGTGA TGGTGAACCG
CGCTTACGTC CTGCCCGTCT GCTCCACGAG GGTGCGGACG AGTCATGGTA CGAGGCTGAC
GTGTTGGTCC ACAATCCCAC CACGCGGTAC CGATTTTTTG TGGTCCTCGA GTCAGGGTAC
GGGTGGGTGA ACCAAAAGGG ATGGTTCACC CACGATGTTC CTGACGCACA CGATTTTCAG
TTGAGCGTGC ACGCTCCTGC ACCCAAGTGG CTCCATGACG GAGTGGTGTA CCAGATCTTC
CCAGACCGGT TCGCGCGCTC CTCCACCGCC CCCAAACTCT CTGAGACGTC TCTTCCTTCG
TGGGCGATCC CAGCAACTGA GTGGAACGAA GAACCCATTG CCAGTGGGCC AGGTGTCTCC
GAGCATTTCT TTGGTGGGGA TCTTGACGGG ATCGTCGAGC ACCTGGACCA TCTCACTGAC
CTCGGTGTCG GGACTGTCTA CCTCACCCCG GTGTTTCCCG GGCAGTCCAA TCACCGCTAT
GACGCATCCA CGTTTGACAG TGTGGACCCG CTCCTTGGCG GGGATGACGC CTATGAGCGT
CTGTCGCAGG CGGTCCACGA CCGTGGCATG CACCTGATGG GGGACATCAC CACAAACCAC
ACTGGCGCAT CACATGAGTG GTTTACTCGC GCAGCACACG ACCCTGATGC AGTGGAACGT
GATTTCTTCT ATTGGATTCC TCAGGAGCCC GGGTACGCCT GTTGGTTAGA ACACCCCTCC
TTGCCCAAGC TGAACTACAC GTCTGAACAA CTGCGCAGCA CGATGATTAA GGGACCACAG
TCGGTTATTG GGCGGTGGCT TCAGCCACCT TTCAGCCTTG ATGGATGGCG GGTTGATGTT
GCGAACATGA CTGGCCGCTA CCAAGACATG GATGTCACCC ACGATGTAGC GAAAACAATC
CGCACAACAA TGCTTGAGAT CAACCCTGAT GCGTTGTTGA TCGCTGAACA CTTTCATGAT
GCCTCAGCGG ATCTTGGTCT TGGTGGCTGG CACGGAAACA TGAACTACTC AGCGTTCACC
CGTCCCGTGT GGGCGTGGCT AGCCAGCAGC GAAGCGGACA TCCCGGCGTT TGGTCTTCCT
GCGCGGATGC CTCGAATCGA TGGCACGACC ATGGTTCAGG TCATGCGGAC CTTCGATTCC
GTCTACCCGT TCACCACGCT CATGTCCCAG TGGAACATGC TGGGATCGCA TGACACCCCT
CGACTGCGTA CCCTGGTGGG GTCGGCGGAC AAGGTGGAGC TTGCCGCCGC GCTTCTCTTC
ACTTACCTGG GCGCGCCCGT AGTCTTTGCC GGTGATGAAG TGGGATTGAC CGGAACTAAC
GGGGAACACG CACGGTCGAC CATGCCGTGG AACGACCCCA CCCGATGGGA CGCCGACACG
CTGGCCATCT ACACAGCGCT GATTCGCCTG CGCAAGGAGC ACCCAGCACT ATCCACCGGC
TCACTGCGGT GGCTCCACAC AACTGACGAT GCGGTGGTGT TCGCTCGGCA GGATTCTCGC
GACACCATCA TTATTGCTCT TGCTCGGGCG CCATGGTCTG GGGTTCGCAT CCCACTGACA
GTCGCGGATC GGATGGTGTG GGACGCATCG GCACACACCT GCGCACAAAG TCCCGCCGCC
AAGAACCCTG AATTGATCTA TGGTCACGGT GAGACAACTG TTACCGACGG TCACCTTGTG
GTACCTGCGA CCGGTCCCGC CGTCCACATG TGGCGCATCA GATAG
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| Protein sequence | MPASPGSIPA VYLVPHHDGS ALYVEKLTPL LGEEVRVRLR VPAGINAREV HVRMVRDGEP
RLRPARLLHE GADESWYEAD VLVHNPTTRY RFFVVLESGY GWVNQKGWFT HDVPDAHDFQ
LSVHAPAPKW LHDGVVYQIF PDRFARSSTA PKLSETSLPS WAIPATEWNE EPIASGPGVS
EHFFGGDLDG IVEHLDHLTD LGVGTVYLTP VFPGQSNHRY DASTFDSVDP LLGGDDAYER
LSQAVHDRGM HLMGDITTNH TGASHEWFTR AAHDPDAVER DFFYWIPQEP GYACWLEHPS
LPKLNYTSEQ LRSTMIKGPQ SVIGRWLQPP FSLDGWRVDV ANMTGRYQDM DVTHDVAKTI
RTTMLEINPD ALLIAEHFHD ASADLGLGGW HGNMNYSAFT RPVWAWLASS EADIPAFGLP
ARMPRIDGTT MVQVMRTFDS VYPFTTLMSQ WNMLGSHDTP RLRTLVGSAD KVELAAALLF
TYLGAPVVFA GDEVGLTGTN GEHARSTMPW NDPTRWDADT LAIYTALIRL RKEHPALSTG
SLRWLHTTDD AVVFARQDSR DTIIIALARA PWSGVRIPLT VADRMVWDAS AHTCAQSPAA
KNPELIYGHG ETTVTDGHLV VPATGPAVHM WRIR
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