| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1503 |
|---|
| Symbol | |
|---|
| ID | 8380673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1615421 |
|---|
| End bp | 1617799 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645004251 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003161455 |
|---|
| Protein GI | 256832728 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.269689 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGAGAC GTATCGAATC GCTTTCAAGC GCGGGAATCT TCGAAGACTT CCGCTGGGAC
GCGACAACGC CCGACTTCGA GAGAGTGAAT CTGATCTACG GCACGAACGG TGCCGGCAAG
ACTTCATTGT CTCGAGCCCT CGACGGCCTC ACACTAGAGC GCGGAGGCTT CGCGAACGCA
TCGATACGGA TGTGCAGCCC GGACGGAACA TCTGAACGCA CGAGCAACAA ACAGCACGAC
GCAGAGTTTG AACGGCTATT CGTGTTCAGC GACGCCTACG TTGAACGCAG CCACAACTTC
GATGGCGATA CCGAGTTGGC TGCGGTGCTT ACGCTCGGTG ATCAGACTGT CGAAGATGAG
AAACGCATCG CGGAACTGCG CACATTGATC AAAGACGCGG AGGATTCATT GCCCACTGCG
AGCGCCAATG CTCAAGCTGC GGAGCGAGCA CTGGAGACGG CGTACATCTC TATTGCTCGT
GGGGTCGTTT CAGCGCTGAG CCGAGCGGGC AAATCCTACG CGTCCAATAG TAACTACAGC
AGTCGCATGG TGAAGACCCG CTTCGCCGGT GATCGCTCCG CATGGGTGCT CCTCCCGGAC
TCCGATCGTG AGGCAGCACT GGCAACCGTC AACTCCGACG AACGTCAGAG AATCGCCCCA
CGCACGTTCT CTCTTCGAGC ACGCGATGAC TTGCCGACCG AGGCAGAGGC CGCGCTCACG
GCCTCGCCGG TGTCCGAGGT GCTCGACACC TTGCGTGCCC ACCCCCACGC TGCGAGTTGG
GTCGAAGCTG GGCAGGGAAT CCACACAGAA CTCGACCAAT GCATCTTCTG TGGAAGCGAA
CTGACCGATG AGCGCAAGGC AGCGATTGAA CGGCACTTCT CAGACGAAGT GACAGTGCTA
CAGCGCAAGC TTGATGGGCT CATCGAAGAG GTTGAAGGCA TGCAACGTAG CCTCAGTGGA
CTCCTCGGAG ATGGCTCCCT CGCTTCCGGG ATGTTTGATG ACCTGCGAAT AGCGTTCGAG
CGAGCACATG CGGAGGCGCT GAATGAGGCG TCGGTCATGA GCACCTGGCT AGATGGACTC
CGCCGCGCTC TTGAACAGAA GCGCAAGAAC GTCGTAGCCG TAGTCGAGTA CGTAGTCAGC
GGAGCGCCGA GCGTCGATGG CGCCGCCCTC GAGAAGTCCA TTGCCGACCA CAACGGCCGG
GTCGACCGTC ACGCGACTCT TGTCCAGGAA GCTGCCAAGA AGGTCGAGCT CCATCTTCTC
AAGAGCGCAG AGAGCGAAGT CGACAATCTC GTCGCCAGCG CTGAAAGCGC TGTGAAAGCC
AAGTCTGAGA TAGAGGCGAA GACGCAGGGG TACCGCGCAG AGGTCGCGGC GCTGGAGAAC
GTTGAGGGCG ATCCCCTTCC TAGTGCAGAG GTGATGGCTA AGGAGCTCAC GCGAATCCTC
GGCAGGAACG AGCTCTCATT TGAGTTGCTT GCTGACGGCA AGCACTACCG CGTGACTCGT
CATGGCGAGC CCGCACGCGG CTTGAGTACG GGGGAGCGAA CGGCGATCAC CCTCATTCAT
TTCCTCGAAG CAGTGAAGCG CGCGGATGCA CAAGGGGGAA AGCCAGTCGT GGTCATCGAC
GACCCGGTAT CGAGCCTCGA TAGCGGATCG TCGATGGGTA TCTCGACCTA CATCTGGAGC
GAGGCCTTGT CGAAGGCGCA CATCGAGCAG ATTTTCCTCC TGACGCACAA CTTCGAGCTC
TTCAGGCAAT GGGACATTCA GATTGATGGG CTAAAAGGTG ACCGCGGGCC GCGCAACAAG
CACGGTTTCC GTTCGAACAC CTACGAGCTC ATCGCGCCCT ACCGCGATGT GCGTGGAACG
CTGAAACGAA GCCCGAAAAT CATCGCCTGG CCGCCGAACG AAGTTGCGCG AAAGAAGATC
CGTTCGGCGT ACCATCACGC CTTCCTGACC GTCGCGCGAG CGCATGTAGC CCTTCGTGAG
GACTCGTCGA TGGAGAAGAA ACTCGACGCA TTGCTCCTGT ACCCGAATGT GCTGAGAAGG
ATGCTTGAGA CGTTCATCGC TTTCAAGAAA CCGGCATCAG TCAGAGACTT CACCGGAGCG
ATGCGGTCGA TGACGGACAG CCTCGCAGCC GAAGGGTACG GGGGTGATCC GGACGCACTA
CGTCTACACC TCACCCGATT TACGCACGCG AACTCGCACT CCGAGTCCCC CGAAAGTGAC
GTGGCCATCG ACCCGAACGA GATTGACGCC GCGATCGCCG CGGTATTCAC GTTCATGTAT
GTCATCGATG AAAAGCACTT CGAGGGCCTC TGTGAAGTCC TAGGACTCGA AGCCGGCGAG
CTGCTGCTGA CTACTCCGGC TGCGACACAA GAGCCTTGA
|
|---|
| Protein sequence | MLRRIESLSS AGIFEDFRWD ATTPDFERVN LIYGTNGAGK TSLSRALDGL TLERGGFANA
SIRMCSPDGT SERTSNKQHD AEFERLFVFS DAYVERSHNF DGDTELAAVL TLGDQTVEDE
KRIAELRTLI KDAEDSLPTA SANAQAAERA LETAYISIAR GVVSALSRAG KSYASNSNYS
SRMVKTRFAG DRSAWVLLPD SDREAALATV NSDERQRIAP RTFSLRARDD LPTEAEAALT
ASPVSEVLDT LRAHPHAASW VEAGQGIHTE LDQCIFCGSE LTDERKAAIE RHFSDEVTVL
QRKLDGLIEE VEGMQRSLSG LLGDGSLASG MFDDLRIAFE RAHAEALNEA SVMSTWLDGL
RRALEQKRKN VVAVVEYVVS GAPSVDGAAL EKSIADHNGR VDRHATLVQE AAKKVELHLL
KSAESEVDNL VASAESAVKA KSEIEAKTQG YRAEVAALEN VEGDPLPSAE VMAKELTRIL
GRNELSFELL ADGKHYRVTR HGEPARGLST GERTAITLIH FLEAVKRADA QGGKPVVVID
DPVSSLDSGS SMGISTYIWS EALSKAHIEQ IFLLTHNFEL FRQWDIQIDG LKGDRGPRNK
HGFRSNTYEL IAPYRDVRGT LKRSPKIIAW PPNEVARKKI RSAYHHAFLT VARAHVALRE
DSSMEKKLDA LLLYPNVLRR MLETFIAFKK PASVRDFTGA MRSMTDSLAA EGYGGDPDAL
RLHLTRFTHA NSHSESPESD VAIDPNEIDA AIAAVFTFMY VIDEKHFEGL CEVLGLEAGE
LLLTTPAATQ EP
|
|---|
| |