Gene Jden_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1481 
Symbol 
ID8380651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1588923 
End bp1589942 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content56% 
IMG OID645004228 
Productlipoyl synthase 
Protein accessionYP_003161433 
Protein GI256832706 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.527679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCA TCGAAGCACG CAACTCCCAA GTGCCCATCG AGAAAAAGCC TGACTGGATC 
AAAACCCGGG CCACTGTGGG CCCGGAATAC ACCGACATGC GGTCACTGGT TCGGCAAGGG
TCACTGCACA CTGTCTGTGA AGAGGCGGGC TGCCCCAACA TATACGAATG CTGGGAAGAC
CGAGAAGCCA CATTCCTCAT TGGTGGGGAT CAATGCACGC GCCGCTGCGA CTTTTGCCAG
ATTGACACCG GAAAACCTGC GGAGTTCGAC CGCGACGAAC CCCGTCGAGT GGCTGAATCA
GTAGCAGAAC TCGGATTAAA GTACTCCACG GTCACTGGAG TTGCTCGCGA TGACCTGCCT
GATGGTGGTG CCTGGCTCTA CGCAGAAACT GTCCGCCAAA TCCACGCACT CAACCCCAAC
ACTGGTGTTG AGGTTCTCAT CCCAGACTTT AACGCCATCC CCGAACTCCT CGACGAGGTC
AACTCCTCAC AACCAGAAGT TCTGGCCCAC AACGTGGAAA CCGTTCCGCG AATCTTCAAG
CAAATCCGAC CAGGATTCCG CTATGACCGT TCCCTTTCCG TGTTAACACG GGCTCGTGAT
GCCGGTCTCA TCACCAAATC CAACCTCATC TTGGGCATGG GTGAAACCAC CGAAGAAATT
GTGGAAGCAA TGGAAGAATT GCACGCAGCA GGGTGCGATT TACTCACCAT TACCCAGTAC
CTGCGCCCCA CAAAACGCCA CCATCCCGTG GACCGGTGGG TTCGCCCAGA AGAGTTCGTG
GAGTTGTCAC AAGAAGCTGA ACGCATCGGT TTTCTGGGTG TCATGTCTGG ACCACTGGTT
CGTTCCTCCT ACCGTGCTGG GCGCCTGTGG GGGCAAGCGA TGCGCAAGAG GAATATGACT
GTCCCTGCCG CCCTTGCTCA CTTACTTGAA CCCACCGTGT CCCGGCAAGA AGCAGCTTTC
CTCACGACAC ATTCGCCCTC AGCGAAGCAA CCCGTGGGCG CTCTCGCTCA AGAGAGCTAA
 
Protein sequence
MLRIEARNSQ VPIEKKPDWI KTRATVGPEY TDMRSLVRQG SLHTVCEEAG CPNIYECWED 
REATFLIGGD QCTRRCDFCQ IDTGKPAEFD RDEPRRVAES VAELGLKYST VTGVARDDLP
DGGAWLYAET VRQIHALNPN TGVEVLIPDF NAIPELLDEV NSSQPEVLAH NVETVPRIFK
QIRPGFRYDR SLSVLTRARD AGLITKSNLI LGMGETTEEI VEAMEELHAA GCDLLTITQY
LRPTKRHHPV DRWVRPEEFV ELSQEAERIG FLGVMSGPLV RSSYRAGRLW GQAMRKRNMT
VPAALAHLLE PTVSRQEAAF LTTHSPSAKQ PVGALAQES