Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1414 |
Symbol | |
ID | 8380588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1515387 |
End bp | 1516574 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645004165 |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | YP_003161370 |
Protein GI | 256832643 |
COG category | [R] General function prediction only |
COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGACCA CCCACCCAGC GCACACGATC CTGACCCCCC ACGGACTGAT CGCTCCAGAC ACAACCAGCC CGCACATCGC CCATATTGCA CACAACGTGT GGGCAAGTCT GCACGACACT CAACCCCACC CCAACCCCTT CACCACCCAT GCGATGGAAT TGGGGTGGCC CACTGCTGAG CGGATCCTTC TCCTCGTCGT TGACGGCTTG GGGTGGCACA ACGTCGCCGA GCACCACGCG GTAGCGCCCA CTCTCACTCA TCTGTTGAAC ACAAGCAAGC CAGCGATGAC TGGTTTTCCC ACTACCACCG CAACGTCCAT GGCGACCATT GGCACAGGGG AATTAGCTGG TCAAACCGGT CTCACCGGGT ATTCAGCGAT CCATCCCCAC ACAGGTGACC TATCCCAGTT CATCTCGTGG AAGAACCTCC CTGACCCCCA TCACCACCAG CAACGCGCAC AACTCACCTC GCTCGCCCAG ACCTACACCA CGGTGACAAG TATTTCGCAG TCCACCTTCA AAGATTCAGG GCTCACGAAC GCGTGCTTTT CCGGCGCCCA CCATGTGTCA GCCGAGACGC TCACAGACAC AGTCAACGCC ACTGTGAACG CACTACGCGC CCCAGGTCTT GTCCACACCT ACTGGGGCCA GATTGATGCA ATAGGCCACG TGACAGGCCC CAACTCGGTG CCCTGGACAA CCGCGCTTGC TGACTTTGAT GTGGCCCTGG CTGATCTTCT TCAGCGTGTC CCACCCGACA CGCTCGTTGT TCTCACAGCC GACCATGGCA TGGTTCACAT CGGCCCGCGC GACCGAATCG ATGTGGCAGA CCACTACGCG CTCATGCGAT CAGTGCGAGG TGTTGCTGGC GAACCGCGTG CCCCACAGAT TTACACCAAC TCACCACGTA GCGCCGCAGA CGTTGCAGCA CGCTGGGCGG ACACACTGGG CAGCCGTGCT GTTGTCCTTG ACCGCCACCA AGCCCAAGAA TCAGGGCTAC TTGGTCAGGT CGATGACCGT GTCGCCCCCT GGTTCGGTGA TGTCCTCGTC CTGACAACAG GCACAACAGC GGTTGTGGAT TCCTCAACGA TGGCAGCTCA AGCCATCGCG CTCAAAGGAA TGCACGGGTC GCTCACACCC ACCGAAGTGC ACGTCCCGCT GCTTGCTGTG CGCCCAGCGG ACCTGTAA
|
Protein sequence | MTTTHPAHTI LTPHGLIAPD TTSPHIAHIA HNVWASLHDT QPHPNPFTTH AMELGWPTAE RILLLVVDGL GWHNVAEHHA VAPTLTHLLN TSKPAMTGFP TTTATSMATI GTGELAGQTG LTGYSAIHPH TGDLSQFISW KNLPDPHHHQ QRAQLTSLAQ TYTTVTSISQ STFKDSGLTN ACFSGAHHVS AETLTDTVNA TVNALRAPGL VHTYWGQIDA IGHVTGPNSV PWTTALADFD VALADLLQRV PPDTLVVLTA DHGMVHIGPR DRIDVADHYA LMRSVRGVAG EPRAPQIYTN SPRSAADVAA RWADTLGSRA VVLDRHQAQE SGLLGQVDDR VAPWFGDVLV LTTGTTAVVD SSTMAAQAIA LKGMHGSLTP TEVHVPLLAV RPADL
|
| |