Gene Jden_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1407 
Symbol 
ID8380581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1510057 
End bp1510800 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID645004158 
Producthypothetical protein 
Protein accessionYP_003161363 
Protein GI256832636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.53529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAACA CACCCTCAGC GCAACCACCA GCGCGCGGGA TGCGTGCCAT CGCCCAAGAC 
AATTTCAACA CCTGGGAAGC CGTTGGCGGA GTACGCGGCC TCATCGAAGC AACAGCCCCA
GGTCTGGTGT ACCTCATCGT GTTTGTGGTC ACCCAGCAAC TGACCCCCGC ACTGATTGGT
TCGTTGGGAC TAGCTCTCGT CTTCGTGGGA ATACGACTTG CGCAACGGAC ACCAGTGACC
CTTGCCTTTT CTGGGGTCTT TGGGGTCGCG ATCGGCGTGT TCGCCGCATG GCGCTCCGGT
AGCGCCGGAG ATTTCTACGT GTGGGGGCTT GTCGTCAACC TCAGCTACGC AGTGGCGCTC
GCGGTGTCCC TGATCGTGCG CTGGCCTGGT GTGGGTGTCC TTGTCGAACT GTTCAAATCA
GGCTTCTCTG ATCAGGCTGC GCGCGCAAAA GCGGGCGAAG ACGTCTCCTG GCGGCAGCTT
TTTGACACCT CGTGGCGCAA CGACAGCGAC CTGATGAAAC GCTACACCAT TGCAACGTGG
TTGTGGATCG CCATGTTCCT CGCGCGCCTG GGAGTCCAAG CCCCACTGTA CTTCGCGGGC
GACGACGCGG TTGGTGCTCT GGGAACTGCC CGCCTCGTCA TGGGTGTTCC ACTTTTTGCG
CTTGTGCTAT GGCTTACGTG GCGGCTGATT CACCGGACGC CAGCACCGAA TGAAGTTGAT
CAACAGTCAC GTCAGGACCT GTAA
 
Protein sequence
MTNTPSAQPP ARGMRAIAQD NFNTWEAVGG VRGLIEATAP GLVYLIVFVV TQQLTPALIG 
SLGLALVFVG IRLAQRTPVT LAFSGVFGVA IGVFAAWRSG SAGDFYVWGL VVNLSYAVAL
AVSLIVRWPG VGVLVELFKS GFSDQAARAK AGEDVSWRQL FDTSWRNDSD LMKRYTIATW
LWIAMFLARL GVQAPLYFAG DDAVGALGTA RLVMGVPLFA LVLWLTWRLI HRTPAPNEVD
QQSRQDL