Gene Jden_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1375 
Symbol 
ID8380552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1471814 
End bp1472770 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content61% 
IMG OID645004124 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_003161334 
Protein GI256832607 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.015073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0495173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCT CCCGCGCCTA CCTCCTTGCT TTCCGCCACG CATGGCGCAT CCCAGGTCCG 
CTATGGCGTG CGTTGATGGC CACGGCAGCA GACATCACTT GGCTCGTGCA CACCAAAGGG
GTACACCAGC TTGAACGTAA CCTCACCCGG GTGAGCCCCA CCGCCAATCC ACGCCAGATA
CGCCAACTTT CCCGTGCGGC GATGCGCTCC TACATGCGTT ACTTTGGCGA AGCGTTCACT
GTCGCCCACA TCACCCCACA ACAACGTGAC GCACGAGTGC GAGTCATCAA CGCACACAAC
CTCGACGCAG CCCTGGCACT TCCCGGCTCA CCCGTCCTCG CGCTGACCCA CCAGGGTAAC
TGGGACCTCG CCGGCATGTG GGCATCAGCA ACCATCCGCC CTGTACTCAC CGTCGCTGAA
CGGCTCAAAC CTGAGGAACT CTTTACAGAG TTCCGCACCT TCCGCGAAAC ACTAGGGATG
ACCATCCTCG CCGCGGGTGA CGACGGTGTT TTCCGAGCCC TGTTGCGGGC AACCCGCACG
AACAACCACC TCATTTGCCT GCTCGCTGAC CGTGATCTCA CCGCAAGTGG CATTGAGGTG
GATTTCAACG GCCACCGTGC ACGCGTTGCC AAAGGCCCCG CAGCCCTGGC CACACAGGGC
CAGGTTCCGC TCATCCCAGT TTCCATCACT TACGAAAAAC TTACCGGACA CCGCCGCGCC
CAAGCAGGCA GCCCTTGGGG GATTGTCGTC GAATTCCACA CCCCTCTTCA CGCCGACCCC
AACGCAACGA CCAAAGACAA CATCACCAAC CTCACCCAAC AATGGGTCAC CACACTTGCC
ACCGCCATCA CCCGCTCTCC CCACGACTGG CACATGCTCC AAAAAGTCTT CACCGCTGAC
CTCAACCCCC ACCACCCCCT TGCGCCGCCC GCCACACCAA AGGAGCACAA TGACTAG
 
Protein sequence
MNSSRAYLLA FRHAWRIPGP LWRALMATAA DITWLVHTKG VHQLERNLTR VSPTANPRQI 
RQLSRAAMRS YMRYFGEAFT VAHITPQQRD ARVRVINAHN LDAALALPGS PVLALTHQGN
WDLAGMWASA TIRPVLTVAE RLKPEELFTE FRTFRETLGM TILAAGDDGV FRALLRATRT
NNHLICLLAD RDLTASGIEV DFNGHRARVA KGPAALATQG QVPLIPVSIT YEKLTGHRRA
QAGSPWGIVV EFHTPLHADP NATTKDNITN LTQQWVTTLA TAITRSPHDW HMLQKVFTAD
LNPHHPLAPP ATPKEHND