| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1323 |
|---|
| Symbol | |
|---|
| ID | 8380500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1418083 |
|---|
| End bp | 1418607 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645004072 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003161282 |
|---|
| Protein GI | 256832555 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.248263 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGA CGCAAGCAGC CCTCGTCATG GTCCTCGGCG CCATCGCAGT GCTCGCACTG
ATGTGGTGGG GGTGGAAAAA CCGACAACAG CGGACCGCGC CTCTAGTCGC CGAACTGCCC
ACTACCCCCA GTGATCTTGG CAACACAATC TACGGGCCCA TCCCCGGGAT CTACGTGTCC
ACAACCACTC ACGGTGACTG GCTCAACCGC ATCAATGCCC ACACCCTAGG GGACCGCTCC
ACCGTCACGG TGACCGTCCA CCAGACGGGC GTCTACCTCG ACCGCCCCAG CGCCACAGGT
ATCTTCATCC CACACCACAC CATTACCGGC GCTGCCCTCA CCCCCGGCAT CGCAGGAAAA
TTCACTGGAA AAGACGGCAT CACCGTCATT TCCTGGACGA TTCCCACCCC ACAAGGTGAC
GCCGTCGAAC TCGACACCGG AATCCGCACC ACCCACAAAA AAGACAAAAC CCCACTCATT
GACGCGATCA CCACACTGCA GGGTCAAGCA AAGGAGTCGC AATGA
|
|---|
| Protein sequence | MNQTQAALVM VLGAIAVLAL MWWGWKNRQQ RTAPLVAELP TTPSDLGNTI YGPIPGIYVS
TTTHGDWLNR INAHTLGDRS TVTVTVHQTG VYLDRPSATG IFIPHHTITG AALTPGIAGK
FTGKDGITVI SWTIPTPQGD AVELDTGIRT THKKDKTPLI DAITTLQGQA KESQ
|
|---|
| |