| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1287 |
|---|
| Symbol | |
|---|
| ID | 8380464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1376222 |
|---|
| End bp | 1377226 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645004036 |
|---|
| Product | putative transcriptional regulator protein |
|---|
| Protein accession | YP_003161246 |
|---|
| Protein GI | 256832519 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.271739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATA GTTCTGTGAG TCCTTCGGAG AGACTTCTCA ATTTGGTGAT TGCATTACGC
AACACCACGG GGAGAATGAC GCGCCGCGAT ATTGCGAATA AGGTCGCGGG CTACTCGCCG
CACGCTTCCC CTGCGGCTTT TGAGCGCATG TTTGAGCGTG ATAAGGAGTT GCTGCGCGAT
TTGGGGATTC CCTTGGTGAC TGATGATGCG TTACACCCTG AGGATGTGGG GTATCGCATC
GATCACGACC AGTATGCGCT TGGGGATGTG CAACTGTCTG CGCAGGAGTT CGCTGTCCTT
GGTGTGGCCG CTGGTTTGTG GCGGCATAGC GGTGTGGAGC AGTTGTCCTC GAGGGCGTTA
ACGAAGTTGC GCGCTGGGTA TGACGGCCCG CAGGAGGTGG AGTTTCTGAC GGGTGTGTAT
TTGTCGTTGC GTGATGTCAC CGATGCGTTT GAGCCAGTGA TTGTTGCGTT GTCCAGGCGG
TGTGCTGTGC GGTGTGATTA TCGTTCCGCG CATTCTGGGG TGACGCGCAG GCGCGTCATT
GAGCCGTGGC GTCTGGTGTT GCGGGAGAGT CATTGGTATG TGATTGGCCG TGATCAGGAC
GCTGGTGAGC CTCGTGTGTT TAAGTTGGCT CGGATGGTGG GGAAAGTAGT TCCGGTGGGC
GGGCAGGGGT CGGTGACTAT TCCTGAGAAC GTGGACACTG ATGCGTTGAT GGGGCAGAGC
GAGTCACAGG TCAATGACCG GCTAGTTCTT GCGGTTCTTC CTGGTAAGGC GTTGCGGTTG
ACTGCTTCTA TGAGGAAAGA CGGTCAGTTG CGGTCCGATG GTCGTATCGT GTGGGTTGGT
ACGTGGGACG GGCGTGAGTC GGTGAGTGAA GAGATCGCAG CGTTGGGTCC TGATGTGCTG
GTTCTCGAGC CTGCTCAGTT GCGTGACCAT GTGGTTTCGA GACTTCAGGC TGCAACTGTG
TTGGCTGGGG AGACGGACAA CTCAAAGGAG CGCCACGATG GCTGA
|
|---|
| Protein sequence | MMNSSVSPSE RLLNLVIALR NTTGRMTRRD IANKVAGYSP HASPAAFERM FERDKELLRD
LGIPLVTDDA LHPEDVGYRI DHDQYALGDV QLSAQEFAVL GVAAGLWRHS GVEQLSSRAL
TKLRAGYDGP QEVEFLTGVY LSLRDVTDAF EPVIVALSRR CAVRCDYRSA HSGVTRRRVI
EPWRLVLRES HWYVIGRDQD AGEPRVFKLA RMVGKVVPVG GQGSVTIPEN VDTDALMGQS
ESQVNDRLVL AVLPGKALRL TASMRKDGQL RSDGRIVWVG TWDGRESVSE EIAALGPDVL
VLEPAQLRDH VVSRLQAATV LAGETDNSKE RHDG
|
|---|
| |