| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1239 |
|---|
| Symbol | |
|---|
| ID | 8380416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1327829 |
|---|
| End bp | 1329067 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645003987 |
|---|
| Product | molybdopterin binding domain protein |
|---|
| Protein accession | YP_003161198 |
|---|
| Protein GI | 256832471 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0303] Molybdopterin biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.382027 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACATG TGACCCACCA TGAGACGTTG ACTGAACCCG CCTGGGACGT TGCCCACGGC
ACTGCACATA TGACCCCTCA CCTGGTTGGT GTGGTGACCC TGCCACTTCA TCAGGCTACC
GGACGTGTCC TTGCCCACGA CCTGAGGAGC GCGACTGCTC TTCCGCGCGA TACGACGTCC
GCTATGGATG GGTACGCGGT AGGCGACTCG TCTGGGCCCT GGCGGCTCGT TGATGCGCCG
GCTCTCGCAG GTCATGTGGG GGCGCGCGAG TTGGAGCCTG GTGAGGCTGT GGTTATTGCT
ACTGGTGGTG TTGTGCCGCA CGGCACGTTC GGGGTTGTGC GGCGTGAGTA CGCGCAGGTC
ACGTCGGTTG ATGGTGGTGA GTTTATTTCT TCGGTCTCGG ACAATGAACC GTGGGATGGG
TCGCATGTCC GGCCTGCTGG GGCTGAGGCA AGCCTGGATG AGGTCATTGT TCACGCAGGT
CAGGTGTTGA CTCCCCCACG TGTGGGGTTG GCTGCGATGG CGGGTGTGGA CACGGTTCGT
GTTCGTCGTT CGGTGACCGT TGATCTCATT GTGTTGGGTG ATGAGGTGAC ACACCGTGGA
GTACCGGGTG CAGGCCAAGT TCGGGATGCG TTTGCTCCAC AGTTCCCCGC CTATTTGCAG
TTGTTGGGGG TGGACGTGAC GCAGGTGATG TTTGTTCCCG ATACCCTTGA CGCTACCGTG
CGTGCCTTGC GTGACAGTGA CGCTGACGTC ATCATCACCA CGGGTGGAAC GGCCGCTGGC
CCGCGCGACC ACCTTCATCG CGGGTTGGAG GCTGTTGGTG CTGAGTTGGT CATTGACTCG
ATTGCGATGC GCCCTGGGCA TCCAAACCTC CTTGCTCGTC GTGATGGTCA GTACATTGTC
GGGTTGCCGG GCAATCCCTT GTCAGCCACC TTGGGTGGGA TGTTGACGCT TGTTCGGCCT
CTTGTGTATG GCTTGCTGGG TCGCCCTGCC CCGGTGTTAG GCCAGGTTGT GACAGCCGAT
GCGGTGGTTG CGCCTGCCCG TGATTCTCGG TTGGTTCCGT TTTCGGTTTC GTGGGTGGCC
GGTCGTGTGG TTGCTCAGGA AACGGGGTGG CTTGGTTCGG GGATGTTACG CGGTTTTGCG
TGTGCTGATG GGGTCATGGT GATCCCACCT GGTGGGGTGG GGGCTGGTTG TGTTGTGCCG
AGTCTTGCAC TGCCGTGGGG CAGTGGTGTG AGTTCATGA
|
|---|
| Protein sequence | MGHVTHHETL TEPAWDVAHG TAHMTPHLVG VVTLPLHQAT GRVLAHDLRS ATALPRDTTS
AMDGYAVGDS SGPWRLVDAP ALAGHVGARE LEPGEAVVIA TGGVVPHGTF GVVRREYAQV
TSVDGGEFIS SVSDNEPWDG SHVRPAGAEA SLDEVIVHAG QVLTPPRVGL AAMAGVDTVR
VRRSVTVDLI VLGDEVTHRG VPGAGQVRDA FAPQFPAYLQ LLGVDVTQVM FVPDTLDATV
RALRDSDADV IITTGGTAAG PRDHLHRGLE AVGAELVIDS IAMRPGHPNL LARRDGQYIV
GLPGNPLSAT LGGMLTLVRP LVYGLLGRPA PVLGQVVTAD AVVAPARDSR LVPFSVSWVA
GRVVAQETGW LGSGMLRGFA CADGVMVIPP GGVGAGCVVP SLALPWGSGV SS
|
|---|
| |