| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1233 |
|---|
| Symbol | |
|---|
| ID | 8380410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1318647 |
|---|
| End bp | 1319984 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645003981 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003161192 |
|---|
| Protein GI | 256832465 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.247406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGA CTTCCTCATC CACGCCACAA CCGGTCACAG TGAGCAACGA CGCTCGCCGC
GACTTGGTTG GCTGGGATCC CAATAACGAC AGAATCTGGG ATTCACGCAT TGCTTGGTCC
ACTTTGTGGG TGACCACTTT CAACCTGGTT CTTGCTTTTG TCATCTGGTA CCTCCCTGGC
GCACTGGTCC CTACCCTTGG AACGCTGACC GGCTGGAACC TCACCGAGAG CCAGTCCTAC
TGGCTTCTGG CCATGCCTGG ACTCACTGGT GGTGCTTTGC GGTTGGTGTG GATGACACTC
CCTCCCATGA TTGGGACCCG CAAGATGCTC ACGCTGTCCA CATTACTCAT GCTCATCCCC
TTTGTGGGGT GGACCTGGGT TGTGACGCTC CCTGAGCAAC CCGCCTACGG ACTCCTTGTG
GCGCTAGCTT TGGCTGCCGG TATTGGCGGT GGGGTCTTTT CTGGGTACAT GCCGTCAACA
TCGTACTTTT TCCCCAAGGC CAAGCAGGGG ACAGCGCTCG GTTTGCAGGC GGGGATTGGA
AACTTTGGTG TTTCCATCGT TCAGTTTGTT GTCCCCTGGG CAATTGGATT TTCGCTCTTT
GGTGTTGCCG GCCAAGTGGC TCAGACTGAC AGCGGTGAGC GCACCGTGTG GTTGCAAAAC
CCAGGGCTGA TTTTCATTCC CTTCGCAGTA GTGGGCGTCA TCCTTGCGTG GACGATGCTC
AGGTCAGTTC CCATGAAGGT TAACCTGCGC CAACAGTTCG ACATTTTCAG CAACAAGCAC
ACATGGCTGA TGACCATGCA ATATGTGCTC ACCTTTGGGA TCTTTTCAGG ACTGGCAGGC
ACATTTGGCA TGTTGTTGAA CGTCCAGTTC GGGGCGCAGT ATCTCACCTG GGTGTTTCTT
GGCGCATTTG TTGGGTCACT GGTGCGGATG TGCTGGGGGC CGTTGTGTGA CCGTTTTGGC
GGTGGAATTT GGACCTTTGT TTCTGGCGTG GGCATGGCTG TGTCTGCTGG TGTGGTTCTC
TTTGGTCAAA TCACTGCCGG AGATGAAGGC CCGTCACTGG GTATTTTCAT GACCGGGATG
CTCATGATTT TCTTCTTCGC CGGGGTGGGC AATGCGTCAA CATTTAAACA GATGCCCATG
ATCTTCCCCG CTCGCCAAGC TGGCGGTGTC ATTGGATGGA CTGCGGCGAT CGCAGCGTTT
GGGCCATTCA TATTCTCGAT GGCCTTCAAC TTCTTCTCCC GTGAAGCAGT GTTCACCTTC
ATCATTGTGT ACGCGCTGGC TTGCGCTGCA GTGTCGTGGT TCTACTACGC ACGACCAGGG
GCGGAGGCAA AGAGCTGA
|
|---|
| Protein sequence | MTPTSSSTPQ PVTVSNDARR DLVGWDPNND RIWDSRIAWS TLWVTTFNLV LAFVIWYLPG
ALVPTLGTLT GWNLTESQSY WLLAMPGLTG GALRLVWMTL PPMIGTRKML TLSTLLMLIP
FVGWTWVVTL PEQPAYGLLV ALALAAGIGG GVFSGYMPST SYFFPKAKQG TALGLQAGIG
NFGVSIVQFV VPWAIGFSLF GVAGQVAQTD SGERTVWLQN PGLIFIPFAV VGVILAWTML
RSVPMKVNLR QQFDIFSNKH TWLMTMQYVL TFGIFSGLAG TFGMLLNVQF GAQYLTWVFL
GAFVGSLVRM CWGPLCDRFG GGIWTFVSGV GMAVSAGVVL FGQITAGDEG PSLGIFMTGM
LMIFFFAGVG NASTFKQMPM IFPARQAGGV IGWTAAIAAF GPFIFSMAFN FFSREAVFTF
IIVYALACAA VSWFYYARPG AEAKS
|
|---|
| |