Gene Jden_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1177 
Symbol 
ID8380354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1251016 
End bp1251828 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID645003922 
ProductABC transporter related 
Protein accessionYP_003161136 
Protein GI256832409 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00421399 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACGG TTCTTGAACT GCACAACGTC ACTGTCCGCC GCGCAGAGAA AAACATCATT 
GACGATGTCA CCTGGCAGGT CAAAGACAAC GAACGCTGGA TTGTCCTTGG CCACAACGGG
GCAGGGAAAA CAACACTCAT CCAACTCGCA TCCGCCCGCA TGCATCCCAC CCAAGGAACA
ACCACCATCC TTGGCGAACA ACTCGGGTCA GTGGATGTGT TCGAACTGCG CCCCCGCATT
GGCCTGGCCA CCGCAGCACT TGCTGAACAC ATTCCTACCG AGGAAACAGT CATCGATGCG
GTCCTCACCG CAGCCTACGG AGTCACCGGA CGTTGGCGTG AAGAATACGA TGACCTAGAC
ACCGAACGTG CACATGACCT CATGGCAGCG TTCCACGTTG ACCACCTGGC GCAACGCACC
TTTGGGACAT TGTCAGAAGG TGAACGTAAA CGTACGTTGA TTGCCCGTTC CCTCATGGCG
GACCCCGAAC TCCTCCTCCT TGACGAACCT GCCGCAGGAC TCGACGTTGC AGGACGTGAA
GAACTCATTG CCGCGCTCAG CGAGCTTGCC GCCCACGAAC TCTCACCAGT GCTGATCCTG
GTCACTCACC ACGTTGAAGA AATCCCTCCT GGGTTCACCC ATTTGCTGCT GCTCAAAGAC
GGACACATTC ACGCAGCAGG CCCCCTGGAA GACACCTTGA CCAGCGAGAA CCTCACACAG
GCTTTCGGTA CTCCGCTCAC CGTCACCAGG ACCGGTAACC GGTACACCGC CGTGGCGACA
CCTGGACAAC GCAAGAACGG TCACCACGCC TGA
 
Protein sequence
MTTVLELHNV TVRRAEKNII DDVTWQVKDN ERWIVLGHNG AGKTTLIQLA SARMHPTQGT 
TTILGEQLGS VDVFELRPRI GLATAALAEH IPTEETVIDA VLTAAYGVTG RWREEYDDLD
TERAHDLMAA FHVDHLAQRT FGTLSEGERK RTLIARSLMA DPELLLLDEP AAGLDVAGRE
ELIAALSELA AHELSPVLIL VTHHVEEIPP GFTHLLLLKD GHIHAAGPLE DTLTSENLTQ
AFGTPLTVTR TGNRYTAVAT PGQRKNGHHA