Gene Jden_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1121 
Symbol 
ID8381769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1198715 
End bp1200571 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content62% 
IMG OID645003866 
Producthypothetical protein 
Protein accessionYP_003161080 
Protein GI256832353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.642413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACG ACGACTCATC AAAGTCCTAC GGTCGGGACT TCCGCGACCG CGATTCGCGA 
GACAACAAAC GCAACAATAG CCAGAGCCAA CAGGGTCAGG GGCGTCGGTG GGAGAACCGC
GATGACCGTG GTCCGCGTCG TGATGATCGT GGGTTTGGTG ACCGTGGTGC CCGTCGTGAT
GGTGATGGTC AGGGGCGTCG GTGGGAGAAC CGCGATGACC GTGGTCCGCG TCGTGATGGT
GATGGTCAGG GGCGTCGGTG GGAGAACCGG GACGACCGTG GTCCGCGTCG TGATGGTGAT
GGTCAGGGGC GTCGGTGGGA GAACCGGGAC GACCGTGGTC CGCGTCGTGA TGGTGATGGT
CAGGGGCGTC GGTGGGAGAA CCGCGATGAC CGTGGTCCGC GTCGTGATGG TGATGGTCAG
GGGCGTCGGT GGGAGAACCG CGATGACCGT GGTCCGCGTC GTGATGATCG TGGGTTTGGT
GACCGTGGTG CCCGTCGTGA TGGTGATGGC CAGGGGCGTC GGTGGGAGAA CCGGGACGAC
CGTGGTCCGC GTCGTGATGA TCGTGGGTTT GGTGACCGTG GTGCCCGTCG TGATGGTGAT
GGCCAGGGGC GTCGGTGGGA GAACCGCGAT GACCGTGGTC CGCGTCGTGA TGATCGTGGG
TTTGGTGACC GTGGTGCCCG TCGTGATGGT GATGGCCAGG GGCGTCGGTG GGAGAACCGG
GACGACCGTG GTCCGCGTCG TGATGATCGT GGGTTTGGTG ACCGTGGTGC CCGTCGTGAT
GGTGATGGCC AGGGGCGTCG GTGGGAGAAC CGCGATGACC GTGGTCCGCG TCGTGATGAT
CGTGGGTTTG GTGACCGTGG TGCCCGTCGT GATGGTGATG GCCAGGGGCG TCGGTGGGAG
AACCGCGATG ACCGTGGTCC GCGTCGTGAT GATCGTGGGT TTGGTGACCG TGGTGCCCGT
CGTGATGGTG ATGGTCAGGG GCGTCGGTGG GAGAACCGGG ACGACCGTGG TCCGCGTCGT
GACAACCGTG AGGCCCCTCC AGTCGCATCG CTTCCTATCC CAGAAGGACT GGAGTTTTCC
ATGCTCGACC GCGACGCGCG GGCTCGACTT CGTGGGCTCT CCAAAGAAAA TGCTGAGTTT
GTGGGCTTGC ACCTTATCGC CGCAGGACAA CTTGTTGACA CCGACCCAGA ACTTGCCTAC
AAACACGCAC AAGAAGCACT CAAACGTGGT GGTCGAGTCG ACATCGTTCG CGAAGCTGCC
GGGCTGACCG CATACTACAC AGAACGCTAT GCGGAGGCTC TCCGTGAGTT CCGTACCGTC
CGCCGTCTTA GCGGCTCAAA CCAGCACCTC GCTCTCATGG CAGACTGTGA ACGCGGTATG
GGGCGCCCAG AACGCGCAAT CGCGTTAGCC CAAGAAGAAG ACATGACTAA AGTGCCCGTG
GACACACAAG TCGAACTGGC GATCGTTGTT GCTGGTGCAC GGGTGGATCT GGGCGACAAC
GAAGCCGCAC TTGCGCATCT GGAAACACTC ACGATCCCCA CCGCCCGACG CGACCTCAAC
GTCCGTATGG TCGGGGCGAA AGTTGCGATC CTCGAACTGC TTGGCCGACA CGACGACGCC
GAGGAACTCC TTTCTCACCT TAGCCCAGCA GAAATCGAAT CAATCGAAGA GCCCTACGAG
GACATCGATG ATGACATCGT CGTCTTTGAC CTTGACGACG AAGAAACCTC CGATACTTCA
CACACACCCT CTGAGGAAGA AGACACGGAG GGAATCGACG CTGACGTCGA GGAGACCACA
GAGAACAACG CATCAGCAGA AACAGATGAA GAAGACGACA AGGACACCAA CGCGTGA
 
Protein sequence
MSNDDSSKSY GRDFRDRDSR DNKRNNSQSQ QGQGRRWENR DDRGPRRDDR GFGDRGARRD 
GDGQGRRWEN RDDRGPRRDG DGQGRRWENR DDRGPRRDGD GQGRRWENRD DRGPRRDGDG
QGRRWENRDD RGPRRDGDGQ GRRWENRDDR GPRRDDRGFG DRGARRDGDG QGRRWENRDD
RGPRRDDRGF GDRGARRDGD GQGRRWENRD DRGPRRDDRG FGDRGARRDG DGQGRRWENR
DDRGPRRDDR GFGDRGARRD GDGQGRRWEN RDDRGPRRDD RGFGDRGARR DGDGQGRRWE
NRDDRGPRRD DRGFGDRGAR RDGDGQGRRW ENRDDRGPRR DNREAPPVAS LPIPEGLEFS
MLDRDARARL RGLSKENAEF VGLHLIAAGQ LVDTDPELAY KHAQEALKRG GRVDIVREAA
GLTAYYTERY AEALREFRTV RRLSGSNQHL ALMADCERGM GRPERAIALA QEEDMTKVPV
DTQVELAIVV AGARVDLGDN EAALAHLETL TIPTARRDLN VRMVGAKVAI LELLGRHDDA
EELLSHLSPA EIESIEEPYE DIDDDIVVFD LDDEETSDTS HTPSEEEDTE GIDADVEETT
ENNASAETDE EDDKDTNA