| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1096 |
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| Symbol | |
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| ID | 8380273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1168524 |
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| End bp | 1169255 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003837 |
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| Product | phosphoribosyl isomerase A |
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| Protein accession | YP_003161055 |
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| Protein GI | 256832328 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
[TIGR01919] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.911554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA GACTTGAACT CCTTCCTGCC GTTGATGTTG TGGATGGGCA AGCTGTCCGC
TTAGTGCAGG GAGAAGCCGG CTCCGAAACG CCATATGGGG ATCCACTGAC TGCAGCGCAG
GAATGGCGTG ACCATGGTGC GGAATGGCTC CATCTCGTGG ATCTCGACGC AGCGTTTGGG
CGAGGAAGCA ACGCGGACCT CCTCAAGGAG GTGATTGCTT CAGTGGATAT ACGCACAGAG
TTATCCGGGG GGATCCGTGA CGATGAGTCA CTTCGGCGAG CGTTAGACAC TGGTTGTACG
CGCATTAACC TTGGTACTGC AGCAATCGAA AATCCCCAGT GGACGGCTCG CGTCATTGCT
GAGCATGGTG ACCGGATTGC AGTAGGTCTC GATGTTCGAG GGTCCACACT TGCCACACGA
GGATGGACCC GCGATGGTGG TGACCTCTGG GAGATGATTG ACCGTCTGAA CGCTGCCGGT
TGTACTCGTT ATGTGGTGAC AGATGTGACC AAGGATGGCA CACTCACTGG CCCCAACGTT
GATCTACTCG CTCGTGTATG TGCAGCTACA GATGCGGCTG TTGTCGCATC CGGCGGTATT
TCCACGCTCG AAGATCTGAC GGTGCTCCGG GGCCTTGTGC CACAAGGGAT CGAAGGAGCA
ATCGTTGGCA AGGCGCTGTA CACGGGCGCG TTCACTCTCC CAGAAGCGCT TGATGTTGCA
GGTCGCCCAT GA
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| Protein sequence | MTTRLELLPA VDVVDGQAVR LVQGEAGSET PYGDPLTAAQ EWRDHGAEWL HLVDLDAAFG
RGSNADLLKE VIASVDIRTE LSGGIRDDES LRRALDTGCT RINLGTAAIE NPQWTARVIA
EHGDRIAVGL DVRGSTLATR GWTRDGGDLW EMIDRLNAAG CTRYVVTDVT KDGTLTGPNV
DLLARVCAAT DAAVVASGGI STLEDLTVLR GLVPQGIEGA IVGKALYTGA FTLPEALDVA
GRP
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