Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0995 |
Symbol | |
ID | 8380172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1052640 |
End bp | 1053491 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645003736 |
Product | CMP/dCMP deaminase zinc-binding |
Protein accession | YP_003160954 |
Protein GI | 256832227 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.870848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTATCT CTGTCGGTGA AGTCGAACAC GCTCACGCGA AAAAAGCGAT CGAAGAAGCA TTGAAGTCCA GCGATAACGC CCGCGTGGGA GCCGTCATCG CACGAGGCGA AACCGTCCTG GCGACGGGCT ACAAGAGCGA AATAGACAAG TTACATGCGG AACAGATCGC GTTACACAAG GCCGAAATGC AGGGCGTTGA TGTCAAAGGC GCGACTCTCT ATACGACTAT GGAGCCGTGT GCCAACTCAC GCACATCCCG AGTCCCTTGC GCGGAGTTGG TTGCCGAGGC AGGTATCGTC GAAGTCCACA TCGGCGAGTA TGACCCGAAC CCCCAGGTCT ACAGGCTTGG CTGGAAGCAC CTTCGCGACC GAGGAATAGG GCTGCGTGAC TTCCCAAAGG ATCTCAGAAA ACAAGCGCAC GAAGCAGGAA CAAACTTCAC GAGGGTGTTC ACTAATGGCT TCGGCGTGAG CGCGGGCGCG AAGTTTGATT TCACGCAGAA CGGAGGGCGC TTCACGATCA GGCTTGATGA AGAAAAAGAC TCGCCTACTT GGGAAACGCG ATGGACAAAC TGTGGCGCAA ATGCGATCTA CTTGAATGGA GGACGCCACG GCGTCGTCGC CCACACCCGG TACGCGGAGC AGTTTAACGA AATCGACGAC CCTGATGCTC TCGACTTCGG ACACCATTCA CCGAAGATCG ACGTTGGGTC AATCGGTGTG ATGCGTAACG AGCATGGCCA TGTACTCTGC AAAGTCACGT CTATCGAACC CACCGCGGAC TATGGTGGCA CTGGCCATGT ATCGGTCACT ATCAAATGGG AGATTCGCTT GCGCAGTTCG GCAGGCGCTT AG
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Protein sequence | MPISVGEVEH AHAKKAIEEA LKSSDNARVG AVIARGETVL ATGYKSEIDK LHAEQIALHK AEMQGVDVKG ATLYTTMEPC ANSRTSRVPC AELVAEAGIV EVHIGEYDPN PQVYRLGWKH LRDRGIGLRD FPKDLRKQAH EAGTNFTRVF TNGFGVSAGA KFDFTQNGGR FTIRLDEEKD SPTWETRWTN CGANAIYLNG GRHGVVAHTR YAEQFNEIDD PDALDFGHHS PKIDVGSIGV MRNEHGHVLC KVTSIEPTAD YGGTGHVSVT IKWEIRLRSS AGA
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