Gene Jden_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0995 
Symbol 
ID8380172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1052640 
End bp1053491 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content56% 
IMG OID645003736 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003160954 
Protein GI256832227 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0117] Pyrimidine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.870848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTATCT CTGTCGGTGA AGTCGAACAC GCTCACGCGA AAAAAGCGAT CGAAGAAGCA 
TTGAAGTCCA GCGATAACGC CCGCGTGGGA GCCGTCATCG CACGAGGCGA AACCGTCCTG
GCGACGGGCT ACAAGAGCGA AATAGACAAG TTACATGCGG AACAGATCGC GTTACACAAG
GCCGAAATGC AGGGCGTTGA TGTCAAAGGC GCGACTCTCT ATACGACTAT GGAGCCGTGT
GCCAACTCAC GCACATCCCG AGTCCCTTGC GCGGAGTTGG TTGCCGAGGC AGGTATCGTC
GAAGTCCACA TCGGCGAGTA TGACCCGAAC CCCCAGGTCT ACAGGCTTGG CTGGAAGCAC
CTTCGCGACC GAGGAATAGG GCTGCGTGAC TTCCCAAAGG ATCTCAGAAA ACAAGCGCAC
GAAGCAGGAA CAAACTTCAC GAGGGTGTTC ACTAATGGCT TCGGCGTGAG CGCGGGCGCG
AAGTTTGATT TCACGCAGAA CGGAGGGCGC TTCACGATCA GGCTTGATGA AGAAAAAGAC
TCGCCTACTT GGGAAACGCG ATGGACAAAC TGTGGCGCAA ATGCGATCTA CTTGAATGGA
GGACGCCACG GCGTCGTCGC CCACACCCGG TACGCGGAGC AGTTTAACGA AATCGACGAC
CCTGATGCTC TCGACTTCGG ACACCATTCA CCGAAGATCG ACGTTGGGTC AATCGGTGTG
ATGCGTAACG AGCATGGCCA TGTACTCTGC AAAGTCACGT CTATCGAACC CACCGCGGAC
TATGGTGGCA CTGGCCATGT ATCGGTCACT ATCAAATGGG AGATTCGCTT GCGCAGTTCG
GCAGGCGCTT AG
 
Protein sequence
MPISVGEVEH AHAKKAIEEA LKSSDNARVG AVIARGETVL ATGYKSEIDK LHAEQIALHK 
AEMQGVDVKG ATLYTTMEPC ANSRTSRVPC AELVAEAGIV EVHIGEYDPN PQVYRLGWKH
LRDRGIGLRD FPKDLRKQAH EAGTNFTRVF TNGFGVSAGA KFDFTQNGGR FTIRLDEEKD
SPTWETRWTN CGANAIYLNG GRHGVVAHTR YAEQFNEIDD PDALDFGHHS PKIDVGSIGV
MRNEHGHVLC KVTSIEPTAD YGGTGHVSVT IKWEIRLRSS AGA