| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0977 |
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| Symbol | |
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| ID | 8380154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1034451 |
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| End bp | 1037969 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003718 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_003160936 |
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| Protein GI | 256832209 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACCTCA AAACACTGAC CGTCCGCGGT TTTAAATCCT TTGCCTCAGC AACGCGTTTC
GACTTTGAGC CCGGAATTAC GTGTGTTGTG GGGCCCAACG GTTCAGGCAA GTCCAATGTG
GTGGACGCTC TAGCCTGGGT CATGGGTGAA CAGGGGGCAA AAACACTGCG CGGCGGCAAG
ATGGAAGACG TCATCTTTGC GGGCACTTCT GCTCGACCTG CACTGGGCCG AGCAGAAGTG
TCACTCACCA TCGACAACTC TGACGGGCGT TTGCCCATTG AGTTCTCCGA AGTGACTATC
ACCCGCACCC TGTTTCGCCA AGGTGGATCC GAGTACGCCA TCAATGGCGC ACCAGTCAGA
CTCTTGGATA TTCAAGAACT CCTCTCTGAC ACAGGGCTCG GCCGCGAAAT GCACGTCATT
GTGGGGCAAG GACAACTCGA CACCGTTCTT CGTGCAACCC CCACCGAACG GCGCGGATTC
ATTGAAGAGG CAGCCGGTGT ACTTAAACAC CGCCGTCGTA AAGAAAAAGC TCTACGCAAA
CTGGATTCCA TGCAAGGAAA CCTCTTACGC CTTGCCGACC TCCTTGCTGA ACTCAGCCGT
CAACTAGGGC CGTTGGCCCG ACAAGCACAA GCCGCGCAAC GTGCCGCGAT CCTCCAAGCA
ATCGATCGAG ACACAAATCA ACGTCTTCTG GCCGACGACC TCACCACCGC TTCCGCACTG
TTGAAGGATC GGCAACAAGT CCTTACCCAA GCGCGTGAGC AACGTGATGA CATCAACCGC
CAACTTGACG TCGTCCGATC CAACCTCGCT CACCAAGAAA AAGCGGCAGC AGACGCCTCC
CCGCGCCGCT CAGCACTCTC ACAGGCCGTC ATCACACTGA GCCGCAACCA CGAACGGCTT
AAGTCACTGA TCCACGTCGC AGAAGAACGT TTGCGTCACC TTGGTGACAC CCACACAACG
CCACCAATAA CTACCACACA CACCACTGAA GCCGCTGCCC GTCATGTACG AACCGCGATC
ACACAACTGG ACGCACAACT CACCGAACAA CGCGACAAAC TCGCACGCAT CACAGCCACA
CGAACAGCAC TGACTGAACG CCTCAACAAA GCCGAGCGAG CCCACAACGA CCAAGTTGCA
GCGCATCGAC ACTACGAAAA AAAGCGTGAC CAACTCACGG CAGACCTCGC CGCACACCGA
GCCCTGATGG ACAACATCGC TGACGACCTC GCCACAGCGC AACAGTCAGC GACCGAAGCG
CTCGCAGCAC TGAACAAGCT CAGCGAACCA ACAGACCTAC CCCCCGCACC AGATACACCA
CCGGACCAAC TCAACCAGGC GCGCGCGATG GAACGAACCT GGGCGGCACG CAGTGCTGAG
CTCGCCCGCG AACTAGCCAC CGCGACGTCG AATCTGTCAG CAGCACAAGC GCGCGTAGAC
ATTCTCACAG CCCAACTACG TGACGTACCG ACACACCTGA GCGACCATCA CGATGTTCAC
GGGACCCTCG TGGAGTTTCT TGACCCCACC GCCGCGCACG CCCCACAGAT GATGGTCGTT
CTTGGGTCAC TTCTTGACGC TCTTGTCGTA GCAACAGAAA AGGGAGCCTA CGAGCTTGCG
CAAGCAGATG ACAACGGGCA ACTTCATCTC ATCCACCTCC CACCAGTCAC TGAGTCCTCA
TCCACACTCG CTACTTCACC TCATCTCAGT GAGCACATTC CTGGGCTTAT CAGTGCCCCT
GACCCACAAC TGCGAGCACA ACTGACCCTT TTCTTACACC AATGGCTCGC AGACACCGTT
CACGTACCTC ACCTCGAGGA CGCCCGTGCA TGGGTCAAAG CACACCCCAC TGACACCGCT
GTGACGGATC AGTGCGACGT TGTCCGCTCT CACCACATCA ACACACGCAG ACAAGGATCA
GCCCACGCGC TGGTGAAAGA GGAACGGGAC CGGCACCACC ATGATGTAGC CACCTGGAAC
GCGCGGTGTG AGGAACTGAC ACGTGAACAC AATGCCGCAG TACAGCGGCA CCAAGCAGCG
ATCGAACAGG TTCGTGTAGC AGAAGAACAG TGGTCCAACG AACGGTCCCA GTACAGTGAT
CTGCGCGCCC AACACGCGCA TGCATCCGCG CAACGCGAGG GTGCACGTGT CGCCCACCAA
CGGGCAACCT CTCACGTGAC CAGCCTCATG GCGAAACATA CCGCCGCCCA CACGCGGGTC
ACTGAACTCA CCACCCTGTT GAACGAGCAC CTCGCTACTG AGCCTGAGCA ACCAGCGGCG
CAGAGCAGCA AGGAGCGTGA AGCACTCAAC GGCGAGCTGC GCACAGTGTA CGACCACGAG
ACTGAGGCGA AAGTCCACCT GCGTGCGTTG CAAGAACAAC GGACCGCCCA GCAGGGAAAG
TTAGCGTCGC TGACGGCAGC CATCGACCGG GAAAGGAGAG CAATTGAGGT CGCTCAGCAG
TTGGCGGACC AGCGAGCGCG CCAGCGACAA GCAACGTCTG AGGTCGCGGA GCAAGCACAC
GCGTTGGTGA TCCATGTGGA GCGGTCAGAG CGTGATGCGC GCGAACAACT GGCGCTCCTT
GAAGACGCAT ATCTCGCTGC AAATGAGCAC ATTAGTGGGT TGCGGAACAA GGAACGTAGC
CTGTCAGAAC GCCACGATGA GGCAAAAGAT CACCTCCACA CAATTGACCT GGAGGTCTCG
GCCTTGCACG CTGAGCACAC CCGCCTCATC GACAGAGCCA TGGCAGAATT TGGTTTCGAC
GCTGAACAAC TCATTGACCA GTACGGTCCG CACCAGTACA CCCCGAACTA CCGGGAGGCA
CTGAAGAAAG GTGGGGACAG CGTTCTCGAG ATGACACAAC CGTTTGACCG TGCTGGCGTC
GAGGCAGCAC GGGAAAGTGC TCGCAAAAAG TTGTCAACCA TGGGGAAAAT CAATCCCCTT
GCCCTAGAAG AGTACAAAGC GTTAGAGGAG CGTCACGTCT TTTTGGCCCA GCAACTCGAT
GATCTGAAAA AGTCACGAGC TGATCTCTTG ACCCTCATCC GCGATATCGA TGATGAAGTC
AAAGCGGTCT TTTTGTCTGC CTACGAGGAC ACTGCCGCTC ATTTCGAGCG GATCTTCCCT
CGTCTGTTCC CAGGTGGAAC GGGACGGATG ACCCTGACTG ACCCACAAGA TCCCTTGGGG
ACAGGAATTG AGATCGAAGC GCGTCCAGCA GGTAAGAAAG TGACACGAAT CTCCCTGTTG
TCAGGTGGGG AGAGGTCCCT GGTTGCGGTG GCATTGCTCG TGGCCATATT CAAAGCCAGG
CCAAGTCCTT TTTACGTCAT GGACGAGGTG GAAGCCGCGC TGGACGACAT GAACCTTTCC
CGGCTCTTGT TGCTGTTCAA GGAACTACAA GAAGACTCCC AACTCATCGT CATCACGCAC
CAAAAACGCA CCATGGAAAT TTCCGATGCA CTCTATGGGG TCACTATGCA CAACGACGGT
GTGTCGACTG TCATTAGCCA CCGACTGACA GCTTCGTAA
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| Protein sequence | MHLKTLTVRG FKSFASATRF DFEPGITCVV GPNGSGKSNV VDALAWVMGE QGAKTLRGGK
MEDVIFAGTS ARPALGRAEV SLTIDNSDGR LPIEFSEVTI TRTLFRQGGS EYAINGAPVR
LLDIQELLSD TGLGREMHVI VGQGQLDTVL RATPTERRGF IEEAAGVLKH RRRKEKALRK
LDSMQGNLLR LADLLAELSR QLGPLARQAQ AAQRAAILQA IDRDTNQRLL ADDLTTASAL
LKDRQQVLTQ AREQRDDINR QLDVVRSNLA HQEKAAADAS PRRSALSQAV ITLSRNHERL
KSLIHVAEER LRHLGDTHTT PPITTTHTTE AAARHVRTAI TQLDAQLTEQ RDKLARITAT
RTALTERLNK AERAHNDQVA AHRHYEKKRD QLTADLAAHR ALMDNIADDL ATAQQSATEA
LAALNKLSEP TDLPPAPDTP PDQLNQARAM ERTWAARSAE LARELATATS NLSAAQARVD
ILTAQLRDVP THLSDHHDVH GTLVEFLDPT AAHAPQMMVV LGSLLDALVV ATEKGAYELA
QADDNGQLHL IHLPPVTESS STLATSPHLS EHIPGLISAP DPQLRAQLTL FLHQWLADTV
HVPHLEDARA WVKAHPTDTA VTDQCDVVRS HHINTRRQGS AHALVKEERD RHHHDVATWN
ARCEELTREH NAAVQRHQAA IEQVRVAEEQ WSNERSQYSD LRAQHAHASA QREGARVAHQ
RATSHVTSLM AKHTAAHTRV TELTTLLNEH LATEPEQPAA QSSKEREALN GELRTVYDHE
TEAKVHLRAL QEQRTAQQGK LASLTAAIDR ERRAIEVAQQ LADQRARQRQ ATSEVAEQAH
ALVIHVERSE RDAREQLALL EDAYLAANEH ISGLRNKERS LSERHDEAKD HLHTIDLEVS
ALHAEHTRLI DRAMAEFGFD AEQLIDQYGP HQYTPNYREA LKKGGDSVLE MTQPFDRAGV
EAARESARKK LSTMGKINPL ALEEYKALEE RHVFLAQQLD DLKKSRADLL TLIRDIDDEV
KAVFLSAYED TAAHFERIFP RLFPGGTGRM TLTDPQDPLG TGIEIEARPA GKKVTRISLL
SGGERSLVAV ALLVAIFKAR PSPFYVMDEV EAALDDMNLS RLLLLFKELQ EDSQLIVITH
QKRTMEISDA LYGVTMHNDG VSTVISHRLT AS
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