Gene Jden_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0929 
Symbol 
ID8380106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp979157 
End bp980713 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content60% 
IMG OID645003669 
Producthypothetical protein 
Protein accessionYP_003160888 
Protein GI256832161 
COG category[R] General function prediction only 
COG ID[COG3596] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC ACACAGCGCA ACCCACGATG GATTATGTTG CAGCCGTCAA CGCGCTCACC 
GAAGCCCGGG AAGCCGGGAA AGAGTACCTG CCCATCGAGC TGCAAAAACA AGTCAGCCAA
TCGTTACGTG CCGTGGACGA ACGACTCGCC CTTGGGGTCC ACCACACCAT TGTTGCGCTC
GCTGGGGGAA CTGGATCCGG GAAATCCTCG ACCTTCAACG CGATCTCTGG TCTCGAGTTC
GCTGATGTTG GTGTGCGCAG ACCCACCACT GCGCGACTCG CGTCGTGCTC GTGGAACTCC
ACCGCCACTG CGCTTCTCGA CTGGCTTGAA GTCGACCACG ACCGACGCAT CTTCCGGGAC
ACCGCACTTG ATGGCGATGA GCAACGCGAG TTTGATGGGC TCATCCTCCT TGACCTCCCT
GACCACGACT CTGTCGCCGA ACACCACCGG CTCATCGTGG ACAAAGTGCT CCCATTGGTG
GACCTCCTGA TCTGGATTGT TGACCCCCAA AAATATGCGG ACGCGGCACT GCACGCGGGG
TACCTGCGCC AACTCGTGGG ACAAGAAACT TCCATGCTGG TTGTCCTCAA CCAGGCCGAC
AAACTCACCG CTGACGAACA ACTCACCATC ACCACCGACC TTGGACGCCT CCTGCACGAC
GACGGTGTCG GTGACGTGGT CATCAGGACG ATCTCTGCGC GCACCGGCGA CGGGGTCGAA
GACCTTCGCG ACGATATTCA ACGTGCCGTT GCCGCCCAAT CCATGGCAGC GCGCCGCCTC
GACGAAGAAC TCGGGCGTAT CGCACGTCTC ATGCGGTCAG CAACGCCGTC AGGCGCCATT
GAAGACCTCT CCTTAACCAC CTCGCAAGAA ATTGACCGGT TCGCTGTGGC AGCAGGTGTC
GACACTGTCA AAGACACAAT TGAATCCGCC ACGCTCGCAG ATCGTGCGAC CGGAACTCCG
CCGACCTTCG GTGCGCCCCA CCAGTCGGCA GTCGACAACC TTCGTCACTC CTGGATTGAA
CGTGTCACCG AACCGCTGCG TGGCGGGTTC GACACAGCAG CCCGAGAAGC AGCAGGTACT
GCCCAGCAAC TTCACGATGC GCTGGTCGCC TCCTGCGCAT CGGTCACCAT CCCTTGGGGG
CCGGTATCAG GTGCCCGCAC AATGCGCACC GCAACCATTG CTGCCATGGC AGCAGGGGCA
TTGGTTGCGA TTGCTGGGAT CTTGTTCACG GTGTTCTCCC CTGTTGCTCT GGGAGTCACG
CTCATGGCAC TGGGTGTGGT CATCAGTGCC GGGGGATATT ACGGGTGGCG CTCATTGAAA
AAGAAGATCC GCTACGAAGC AACCGAACGT GCCCAAGCAT TTGACGAAGA CGCCCGGCGG
GCCATCGGGG TTGCCATCAC AGAGGTGTTG TTCGTGCCTG TTCAACCGGT GTTAGATGTC
CACCACACGA TCCGGCGAAC CACCCGAACT GTGGAAAAAG CAACCCGCAC AGATATCCCC
AAGGCCGCGC ATAGGGATGC TCATCCACAA GGTGAGCTTC CCCGACGCAC CACCTAA
 
Protein sequence
MTDHTAQPTM DYVAAVNALT EAREAGKEYL PIELQKQVSQ SLRAVDERLA LGVHHTIVAL 
AGGTGSGKSS TFNAISGLEF ADVGVRRPTT ARLASCSWNS TATALLDWLE VDHDRRIFRD
TALDGDEQRE FDGLILLDLP DHDSVAEHHR LIVDKVLPLV DLLIWIVDPQ KYADAALHAG
YLRQLVGQET SMLVVLNQAD KLTADEQLTI TTDLGRLLHD DGVGDVVIRT ISARTGDGVE
DLRDDIQRAV AAQSMAARRL DEELGRIARL MRSATPSGAI EDLSLTTSQE IDRFAVAAGV
DTVKDTIESA TLADRATGTP PTFGAPHQSA VDNLRHSWIE RVTEPLRGGF DTAAREAAGT
AQQLHDALVA SCASVTIPWG PVSGARTMRT ATIAAMAAGA LVAIAGILFT VFSPVALGVT
LMALGVVISA GGYYGWRSLK KKIRYEATER AQAFDEDARR AIGVAITEVL FVPVQPVLDV
HHTIRRTTRT VEKATRTDIP KAAHRDAHPQ GELPRRTT