Gene Jden_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0886 
Symbol 
ID8380069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp947615 
End bp948418 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID645003627 
Producthypothetical protein 
Protein accessionYP_003160851 
Protein GI256832124 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA CAGTTCTTGG GATGGCCGGC TCATATCCTG GCCCGCAGTC ACCTGCATCG 
AGCTACCTGG TTCAAGCAGA CGACGAGGAC GGGAAACAGT GGTCTGTTGT CCTTGATCTA
GGCTCCGGGG CACTGGGGGC ATTGCAACGG CACGTCAACC CTTTTGACGT GAACGCGGTG
TTTTTATCCC ACCTGCACCC CGACCACTGC GCGGACATGG CCGGTTATTA CGTGTACTAC
CGGTATCACC CGTCGTATGG CACGGAGAAA TCCCAATGCA CACCCGTCAC CGTCTACGGT
CCTCGGGACA CCCAAGAACG CCTCGGGTGC ATGTACGGGC TCGACGAGGG CGAAAACATG
GATGGTCAGT TCGTCCACAA CACTCTCAGT GATGGTGACC GTATCGAGGT TGGTCCACTG
ACCATCGATG TGCGCAGCGT GCGTCACCCC GTTGAAGCCT TTGGGTTCCG CATCGAAGGG
CCCAGCGAGC ACTCACCTGC AGACCGTGTC ACCCTGGCCT ACACCGGAGA CACCGACATC
TGTGACTCCC TTGACGACCT GGCAGCGAAC GTGGACCTCT TTTTGTCCGA AGCGGCCTTC
ATCGAAGGCC GCGACGACGC AATCGAAGGG CTCCACCTGA CCGGCGCAAA AGCTGGTCAC
ATCGCAGAAC GTGCAGGGGC ACGATCCCTG GTTCTCACCC ACATCCCCGC GTGGAACGAC
CCTCACGTCT CTGTGCGCGA AGCCCACGAC CAGTACTCCG GCCCCATCAG CGTGGCAGAA
CCCGACCGTA CCTATATTCT CTAA
 
Protein sequence
MKLTVLGMAG SYPGPQSPAS SYLVQADDED GKQWSVVLDL GSGALGALQR HVNPFDVNAV 
FLSHLHPDHC ADMAGYYVYY RYHPSYGTEK SQCTPVTVYG PRDTQERLGC MYGLDEGENM
DGQFVHNTLS DGDRIEVGPL TIDVRSVRHP VEAFGFRIEG PSEHSPADRV TLAYTGDTDI
CDSLDDLAAN VDLFLSEAAF IEGRDDAIEG LHLTGAKAGH IAERAGARSL VLTHIPAWND
PHVSVREAHD QYSGPISVAE PDRTYIL