Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0827 |
Symbol | |
ID | 8380010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 889451 |
End bp | 890740 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003568 |
Product | inner-membrane translocator |
Protein accession | YP_003160792 |
Protein GI | 256832065 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.868733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.817289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCA CGACGCAGGC TCCCTCGTTA AAACACTACG AGGGTAACGT CCTCGCCCCA ATCTCGTGGA AGGGCCCGAT CACCTATGTG ATCCTTGGGC TCCTCACTAT TGGGTGGTTC GGTTTTGGTT CGCCCTCTGG AGCCCAAACC CGGTTTTTGC TGTCGCAGGG ACGCGACGCG ATTAAGCTGG ATCCGCTGTT CCTTGCCGCA CGTCCATGGG CGTTGTTCCT TGGCTTTGTC ATCCTTGCGC TTGCTGGGTT TGCGGCATAT GCAGCAGTCA AACGCTACCG ATTCGGTGTG TGGTTGCCCG TGCTTGTCGG TGTCGCCGCA GTGTTCGCCT TCCTCTTGTG GTCAGGCGCC GGAAAAGAAG CGGCCATCCC GTTGTCACAG CTGTTGGCCC AGGGAATTGT GTTTGCCGTG CCGCTGGCCT TTGGGTCGAT GGCAGGGTTG ATCTGTGAAC GTGTCGGTAT CATCAATATC GCCATTGAGG GACAATTGCT TGCGGGTGCG TTTGCTGGTG CTGTTGTCGC CACAGTAACT GGTAACCCGT TCACTGCGCT GTTGGTGGCT CCGATTGCCG GGGCCCTGGT TGGTGCGCTG TTGGCGTTCT TCTCGATCAA GTATCGGGTC GATCAAATTG TTGTCGGTGT TGTGCTCAAC GTCCTGGTCA TTGGGGTCAC GAGCTACTTG TTCTCCACCA TTTTGAAAGA CAACAAGTCG CTGTTGAACC AGCCCCCAGG GTTGCCGACG ATACGGATTC CACTTCTCGC GGACATCCCT GTTTTTGGTG GGGTGTTCTT CAACCAGAAC GTGCTCGTCT ACATCATGTT TGCTGCTGTG TTCGTGTTGC AGTTCATGTT GTTCCGGTCC AAGTGGGGGC TACGGATGCG TTCTGTCGGT GAGCACCCGA AGGCTGCTGA CACGGTGGGA ATCAAGGTCA ACCGGACTCG GTGGCTGAAC ACCATGCTCG GAGGGGCTGT GGCTGGTCTT GGCGGTGTTG CTTTCACCAC GATGATCGCG GTGACTTTCG GTAAGGAAAT GACCGCAGGT AAGGGGTATA TCGCTCTTGC CGCGATGATC CTTGGCCGCT GGAACCCTAC TGGTGCGTTT GCGGCCGCGT TACTCTTCGG CTTTGCTGAG GCGCTGCGCG GGACGCTCTC GATTGTGGGA ACACCTGTTC CTACCCAATT CTTGGCGATG CTTCCCTACC TTGCCACGAT CTTTGCGGTT GCTGGATTGG TGGGCAAAGT TAAGGCACCA GCTGCTGAAG GCATCCCGTA CGTTAAGTGA
|
Protein sequence | MSATTQAPSL KHYEGNVLAP ISWKGPITYV ILGLLTIGWF GFGSPSGAQT RFLLSQGRDA IKLDPLFLAA RPWALFLGFV ILALAGFAAY AAVKRYRFGV WLPVLVGVAA VFAFLLWSGA GKEAAIPLSQ LLAQGIVFAV PLAFGSMAGL ICERVGIINI AIEGQLLAGA FAGAVVATVT GNPFTALLVA PIAGALVGAL LAFFSIKYRV DQIVVGVVLN VLVIGVTSYL FSTILKDNKS LLNQPPGLPT IRIPLLADIP VFGGVFFNQN VLVYIMFAAV FVLQFMLFRS KWGLRMRSVG EHPKAADTVG IKVNRTRWLN TMLGGAVAGL GGVAFTTMIA VTFGKEMTAG KGYIALAAMI LGRWNPTGAF AAALLFGFAE ALRGTLSIVG TPVPTQFLAM LPYLATIFAV AGLVGKVKAP AAEGIPYVK
|
| |