Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0755 |
Symbol | |
ID | 8379939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 822389 |
End bp | 823087 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645003497 |
Product | ABC transporter related |
Protein accession | YP_003160721 |
Protein GI | 256831994 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.151949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGAAG TGTTGCGCGT TTCCGAGCTT GTGTGTGGTT ACAAGAAGCC ACTGTTTGAT CCCATCAGTT TCAGTCTGGA ACCGGGGGAG TCTATCGCGA TAACAGGAAA ATCAGGGACA GGGAAAACCA CAGTACTCAA TACGGTCTTG GGTTTCATGT CCCCTATATC TGGCAGTGTC GTTATTGATG GCCGCGAAAT TGGCGGTCTT CCATACCAGC AATTGGCACG CCTGCGGTCG TCTGTTGTGG GAACCGTGTT CCAACACGGT GAACTACTCA GCGAGTATTC AGCCACGGAC AACGTTGCAC TTGCGAGACT ACTCATGAAA AAGCGTGATT CCGCTGCCTA TGAGACCGCA CGAAAGTTGG TCGACTCATT CCAGGTGGAA CCCACGCGAA TGGCGCGTGA TCTGTCTGGC GGAGAGCGAC AACGCGTCGC GTTGGCCAGG GCTTTGATAA ACCAGCCCAA ACTGATCCTC GCTGACGAGC CCACGGGATC GCTCGACCCA GAATCAAGAG ACGACATCGT GGGTCGACTG ATCGATGTAT CTCGAACCCA TGGCACTTCC TTGGTGATTG TCACTCATGA TCCAGTGGTC GCTGCTATTG CTGACAAGCA GCTTCGATTG GTTCCGGCTG TGCCTCAAGC AGGCGAGATA GCCGGCGTCG GCAGACTAGC TAGTGGCGCT CTGAAGTGA
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Protein sequence | MEEVLRVSEL VCGYKKPLFD PISFSLEPGE SIAITGKSGT GKTTVLNTVL GFMSPISGSV VIDGREIGGL PYQQLARLRS SVVGTVFQHG ELLSEYSATD NVALARLLMK KRDSAAYETA RKLVDSFQVE PTRMARDLSG GERQRVALAR ALINQPKLIL ADEPTGSLDP ESRDDIVGRL IDVSRTHGTS LVIVTHDPVV AAIADKQLRL VPAVPQAGEI AGVGRLASGA LK
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