| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0667 |
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| Symbol | |
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| ID | 8379852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 709398 |
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| End bp | 710153 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645003404 |
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| Product | ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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| Protein accession | YP_003160634 |
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| Protein GI | 256831907 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0510522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCCGGA GAGCTGGGCT GACCCACTTG TCTGACAACT TCACAGCGCT TCGCGATGCG
CTCCCCCAGA TTCTCGACGG CATGGGGATC ACCCTGCTCT TGACCCTGGG GGGCGCATCG
CTCGCTCTCG TCGTTGCGGT TGCTCTCGGG TTGCTCGCGC GGTTCGACAA CGTCCTTGTG
CGAGGAACCG CACGGGTGTT TATCGAATTC TTCCGCGGAA CATCACTCGT TGTGCAACTA
TTCTGGCTGT TTTTTGTTCT CCCGCGTTTT GGGGTGGAGC TCCCTGCTCT CGCGGTAGGA
ATTGCGGCCT TGGGATTGAA CTACGGTGCC TACGGAGCGG AAGTGGTCCG TGGTTCGATC
AACTCCGTTC CTCAAGGACA GTGGGAAGCA ACAACGGCAC TGAGTTTGAG TCGAACACAG
CGGATGTGGC GAATCATCTT CCCGCAAGCC TGGGCGCTGA TGATTCCCTC GCTAACCAAT
CTCCTCATTC AACTACTTAA AGGGACTGCG ATCGTGAGCA TCATCGCGAT GGCTGACCTG
ACCTTCATGC TGGGGAAGCT GCGTCAAGAC ACCGACACGT TCTTTGCGTA TTCGGTTGGG
CTGATTCTGT ACTTCGTTCT CGCATACATC CTCACCCTAG GCATGAACGC AATGGAGGTA
CGGGCTAAAC ACAAACTTGG TCGCGGACAG TCGCTGCGGG ATGTCTTGAG TTTCCGTTCC
CTGAAAGCAA GCGCCGGTAA GGGGGAGAAC CAATGA
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| Protein sequence | MCRRAGLTHL SDNFTALRDA LPQILDGMGI TLLLTLGGAS LALVVAVALG LLARFDNVLV
RGTARVFIEF FRGTSLVVQL FWLFFVLPRF GVELPALAVG IAALGLNYGA YGAEVVRGSI
NSVPQGQWEA TTALSLSRTQ RMWRIIFPQA WALMIPSLTN LLIQLLKGTA IVSIIAMADL
TFMLGKLRQD TDTFFAYSVG LILYFVLAYI LTLGMNAMEV RAKHKLGRGQ SLRDVLSFRS
LKASAGKGEN Q
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