| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0620 |
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| Symbol | def |
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| ID | 8379805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 659817 |
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| End bp | 660554 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003357 |
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| Product | peptide deformylase |
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| Protein accession | YP_003160587 |
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| Protein GI | 256831860 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCGTGCT TTCCCCGTGG TGAGTTCGTG AATGTGCCCG GCGTGGAAAC GCCGGGCACT
GTGCGTTCGT GGCACGATGG TGGTGTGACT GCTGTGAGTG TTCGTGATCA AGTGTGTGAG
TTGTTGGCGT CGTGCCCTGA TGGGGTGTTG CCTCTTGTTC ATGCCGGGCA TCCTGTGTTG
CGCAGGGAGG CGGGGCGTTA CGAAGGGCAA CTGGGTGCTG ACTTCATGGC GTTCATTGAT
GCAATGAACA CCACGATGGT GGTGGCACCG GGGGTTGGTT TAGCTGCACC CCAAGTGGGG
GTGAGTCTGG CTGTGGCGGT GATGCGTGAT CCGGGTGCGG CGGATGATGC TGATCCGCGT
GAGCGGGTGG CATTTCCGAT GCGGGTGTTG GTGAATCCGG TGTATGAACC GGTGGGGGAT
GAGAAGGTGT CGTTTTTTGA GGGCTGTTTA TCTGTTCCTG GGTACCAGGC GGTTGTCGCC
AGGTGGCGTC GGGTGCGTGT GATGGGCTGG GATGAGACTG GTGCGCCTGT TGATGAGGTA
TTGACTGGGT GGCCGGCTCG GATTGCTCAG CATGAGATTG ACCATTTGCG TGGTGTGTTG
TACGTGGATC GTGCGCATTT GCGGTCGTTG TCGACGATGG AGAATCTTGC GCAGTGGTGG
TCGGTGTCTG CTCATCCGCA TGCTGCGGGG GAGGCGTTAG GTTTTCCGGT TGAGCAGCAG
GGTTCATGGA CGCAGTAA
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| Protein sequence | MPCFPRGEFV NVPGVETPGT VRSWHDGGVT AVSVRDQVCE LLASCPDGVL PLVHAGHPVL
RREAGRYEGQ LGADFMAFID AMNTTMVVAP GVGLAAPQVG VSLAVAVMRD PGAADDADPR
ERVAFPMRVL VNPVYEPVGD EKVSFFEGCL SVPGYQAVVA RWRRVRVMGW DETGAPVDEV
LTGWPARIAQ HEIDHLRGVL YVDRAHLRSL STMENLAQWW SVSAHPHAAG EALGFPVEQQ
GSWTQ
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