| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0556 |
|---|
| Symbol | |
|---|
| ID | 8379741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 603465 |
|---|
| End bp | 603962 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645003288 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003160523 |
|---|
| Protein GI | 256831796 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.467716 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACA ATAGGGGTAT GCAGCAAGCA CAGTTTCCGT CACAAGCGTT CCCTGCCTAT
CCTCGTTTGA GTGTAAATAA ACCTGATGGG TGGGTAGAAC TCGCGGCGGT CGGGTTGCCC
CTTGCACTTG CGGCAGAGGT GCCCGCTGGT GCTTTTCGAC CGAACGTGCT TGTGACCCTG
ACGCGACACG GAGCAGATTT TCAGGTGGAG CACGCCGTCA AGGACCTGAA TAAGCGGCTC
AAGGCATTGA CGCGCTTTCG GGAGGAAGAG CGGGTCACTG ATCACGCACA TGGCGGTGAC
CGCATTCGGG TACGTGGGCG TTTCGCTGGG GCTCGTGGTG AAGTGGTCCG GCAAGATGTG
AGCGTTGTGG TGATAAACCG TGGACATGTG TATGACGTGG TCGAGATCAC GGGTACATGT
TCCCTGGCAT CAGGTGACAA TAGAGAGACA GAGATCCGTT CCGTCATTGA CTCGCTCGTG
GTCACGTGTG ACGAGTAG
|
|---|
| Protein sequence | MTDNRGMQQA QFPSQAFPAY PRLSVNKPDG WVELAAVGLP LALAAEVPAG AFRPNVLVTL
TRHGADFQVE HAVKDLNKRL KALTRFREEE RVTDHAHGGD RIRVRGRFAG ARGEVVRQDV
SVVVINRGHV YDVVEITGTC SLASGDNRET EIRSVIDSLV VTCDE
|
|---|
| |