Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0551 |
Symbol | |
ID | 8379736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 596801 |
End bp | 598324 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645003283 |
Product | proton-translocating NADH-quinone oxidoreductase, chain M |
Protein accession | YP_003160518 |
Protein GI | 256831791 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.253401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.781277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATCG ATTCCCTCCC GCTCATCACG ATCACTGCGG CCATCCCGCT GGTTGCTGCC GTGGTGTTGT GGCTCCTGCC TGCAACCGTG GCTCGAGTTG CGCGCCCCAT TGCTTTGACA GCGTCTCTTG TGACGCTTGG AGCCGGTGTC GTGATGGTGG CATCGTTTGA TACTAGTCAG TCTGCAACCC ATCAATTTGT AGAAACGTAT CGCTGGATTG AGCCTATTGG CGCCTCGTAC GCTGTTGGTG TTGATGGGGT GGGCCTTGCA CTGGTGATAC TGTCAGTTCT TCTTGTGCCG CTTGTCATCT TGGCGGCGTG GAAGGAACAC GGTGGTGTGA CGGTTGGTTC GGGCTCGAGG TTGCGTCACT ACCTCGCCCT CATTTTGGTA CTCGAAACGA TGATGGTGCT GATCTTCGCG GCCAGAGACG TGTTCTTGTT CTATGTCGTC TTCGAAGCGA TGCTCATTCC GGTCTACTTC ATGATCGGGC TGTTTGGGCA CGGGGCTCGC AGGCGTTACG CTGCGATCAA GTTCCTCTTG TTCTCCTTGG TTGGTGGGCT CATCATGCTC ATCGCGATGA TCGCTTTGTT CATCACCGGG CCAGGCGGAG CGGAAGGTTT CCTCATCTCA TCATTGACTG GTGCGGTGGA AAACCCAACC TTAGAGAAGT GGATCTTCCT CGGGTTCTTC ATTCCCTTTG CCATTAAGGC GCCAATGTTC CCCGTCCACA CCTGGCTACC TGACACGGCA CAGCACGCCC CGGCAGGAAC ATCTGTCCTA CTGGTTGGCG TTCTTGACAA GGTCGGGACT TTCGGGATGC TGACGTTGTG TTTGCCACTG TTCCCCAACG CGAGCCAGTG GGCGGCCCCC ACCATCATTA TCCTCGCACT GATATCGATC ATTTACGGTG CACTGTTAGC GCTGGGCCAA CGCGACCTCA TGCGGTTGAT TGCTTACACG TCGGTGTCCC ACTTTGGGTT CATCGTCTTA GGGATTTTCA CGTTCTCGTC AGCGGGAATC TCAGGATCTG CGTTCTACAT GGTCAACCAT GGCCTGTCGA CAGGTTTAAT GTTCCTGGTC GCTGGCTTCC TCTTCCTGCG CTCACGGAGC GTGACACCGC AGCACATTGC CGAATATGGG GGAATGCAAC GGGTCACTCC TGTTCTCGCC GGGGTGTTCC TGGTTGCAGG TCTGTCCGCA CTATCAATGC CCGGTCTTTC CACATTTATT TCAGAGATCA CCGTGCTCAT CGCAGCGTTT GACACTTCTC CTTGGGTTGC TGCTATTGCT GCACTTGGTG TCATCCTTGC CGCGCTCTAT ATTCTCTTAA CCTACCAACG CATCTTCACA GGGCCGCCGC CTGCCAACAC AGAACCAACC GCGGATCTCA CTGTCCGCGA GAAGGTGGTG GCTGCACCCC TGATTGCTGT GATGCTCCTC TTGGGTTTCC TGCCCGGATT AGCTCTTTCC TACCTCAGCG AACCGGCTGA TGTCGCTGTC ACCACTGTGC AAGGAGGCAA CTGA
|
Protein sequence | MSIDSLPLIT ITAAIPLVAA VVLWLLPATV ARVARPIALT ASLVTLGAGV VMVASFDTSQ SATHQFVETY RWIEPIGASY AVGVDGVGLA LVILSVLLVP LVILAAWKEH GGVTVGSGSR LRHYLALILV LETMMVLIFA ARDVFLFYVV FEAMLIPVYF MIGLFGHGAR RRYAAIKFLL FSLVGGLIML IAMIALFITG PGGAEGFLIS SLTGAVENPT LEKWIFLGFF IPFAIKAPMF PVHTWLPDTA QHAPAGTSVL LVGVLDKVGT FGMLTLCLPL FPNASQWAAP TIIILALISI IYGALLALGQ RDLMRLIAYT SVSHFGFIVL GIFTFSSAGI SGSAFYMVNH GLSTGLMFLV AGFLFLRSRS VTPQHIAEYG GMQRVTPVLA GVFLVAGLSA LSMPGLSTFI SEITVLIAAF DTSPWVAAIA ALGVILAALY ILLTYQRIFT GPPPANTEPT ADLTVREKVV AAPLIAVMLL LGFLPGLALS YLSEPADVAV TTVQGGN
|
| |