Gene Jden_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0529 
Symbol 
ID8379714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp572054 
End bp573184 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content58% 
IMG OID645003261 
Producthypothetical protein 
Protein accessionYP_003160496 
Protein GI256831769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.308782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00891626 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTGAATG TGGTGAGTCC AGTGTCCCGT GTGGTGGGCG ACGGTCGGCG TTGGCGTGAG 
CGTCGCGTTC GTGTCCAGGT TGTTTCTGCT CTGGTCGCGG CGGCCAGCAT GGTGGCAGTT
GCTGGGTGCG GCACAACAGA ACCTGCACCA ACAGTCACTG CGACGGCGAC CACAACTCCT
GATGCGCAGA TGTCGAAGTC TGCGCCACCA GAACCAGAGG TCACGCCCGT GTGGCCGTTG
ACGGGGCGGG AAACATCAAA GGATACCGAC CGCCCAGTGG TGTCGGTGAA AGTGGAGAAC
TCAGCATCCG CCCGGCCGCA ATCCGGACTT GAAGACGCTG ATGTGGTGTG GGAGACCATT
GTTGAGTTTG ATGTGTCTCG GTTGATTGCT GTGTTTCATT CGCGCTATGG GCGTGATGTG
GGGCCAATTA GAAGTGTGCG TCCTATGGAC CCGACAGTCG TTGCGCCGCT GGGCGGGGCG
TTGGTGTACT CGGGTGGTCA ATCCGGAATC CTCAAGCTCG CCCGTGGAAT GTCAACGGTG
ACCACAATTG ATGAAAACAA CGCAAGTGGG TCGATGTGGC GGGCCCGCGG CCGCTATGCA
CCCCACAATC TGTATGGTGA CACCACAAAG ATGGCGGGTT TGGTGGGAAA AAAGTATGCC
TCCGAACCCA AGGAGCAGTT TGCGTTTGCT CCTGATGCGG CTTCAGCCAC AGCGGTTACT
CAGGGGCGCC GGTCCAATGG GGCGTCGTTA GTCATGTCGT CGCTGTCTGC ACCGTCCTGG
ACGTGGAATA GTGATGACAA GACGTTCATG CGGTTCGAAG GCGGCAGTGC GCACGTCTCG
GCAACTGCCG GTCAATTGTC TGCAGTGAAT GTGGTGGTCA TTGAAGCCAA ACACATTGAT
TCAGGGTTTA ATGCCCAGAA CAATGCCCCT GTACCTGACT ATGTGTTAAC CGGAACCGGG
AAAGCAACAG TGTGGTCACA CGGACATGTG GTGCGCGGGA CGTGGCACAA AAAGAAGAAG
TCATCAGCGT TGGTGCTGCG GACCACTGAC GGTGACGAAC TGCTGTTGGC GCCGGGAAAC
ACGTGGGTAG AACTCCTCCC ACAAGGCAAA GGGACCGTCA CGGTCAAGTA A
 
Protein sequence
MVNVVSPVSR VVGDGRRWRE RRVRVQVVSA LVAAASMVAV AGCGTTEPAP TVTATATTTP 
DAQMSKSAPP EPEVTPVWPL TGRETSKDTD RPVVSVKVEN SASARPQSGL EDADVVWETI
VEFDVSRLIA VFHSRYGRDV GPIRSVRPMD PTVVAPLGGA LVYSGGQSGI LKLARGMSTV
TTIDENNASG SMWRARGRYA PHNLYGDTTK MAGLVGKKYA SEPKEQFAFA PDAASATAVT
QGRRSNGASL VMSSLSAPSW TWNSDDKTFM RFEGGSAHVS ATAGQLSAVN VVVIEAKHID
SGFNAQNNAP VPDYVLTGTG KATVWSHGHV VRGTWHKKKK SSALVLRTTD GDELLLAPGN
TWVELLPQGK GTVTVK