Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0480 |
Symbol | |
ID | 8379665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 515374 |
End bp | 516561 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645003212 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003160447 |
Protein GI | 256831720 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGCGT TCATTGATAC CTTCCACGAC TGCGCCCTCG ACATGAGCGC CCGCCTCCAG CGCACACTCC TACTCGTCAT CGCAGTAGCG CTCGGTGCCG GAACATTCGT CATGTCCCTG GGGTCCAATG TGACCGCCTC CCACCAGATC ACCAACGACA TGGCGGCAGG AACCCTCGAC CACATCAGTG TGAGCGTCTC CGGCGGAACA GAAACCCGAA CCTTCCCCGA CAATGCCGAC ACCCGCGCGC TAACCCTCCC CATGGTGGAA TCCTCAGCCC GCAGACTCGA CATCAGCATC GACCGGGTAC AACCCAACCG GTTCACCACC GCAAACCTCG ACGACTACAT CACAGACGTG ACCGTCACAG GAGTGACCTC CGGTTACTTC GACGTCATGG ACATCACCGG CGGAACACAA GGACACTGGG TGCTTGACGC AACCGAACAC ACCAACGTGG CCTACCTCGG TACCACAGCC GCCCAACAAC TTGGAATCCC CACCGACACC CCCTACCCAA CCGGCTACCA AATCTCACTG GCAGGACGCC GCGTTGACGT CATCGGGATC GTGCACTCCT CACCACGAGC ACGCATCGAC CACCTCATCA TCGTGCCCTA CGCCTACGCG CTCGCAGTAG AACCCACTGA CAGTCAAGCA GTGTTGACGG TGCGCACAGC AATCGGTGCA GGGGGGCCAG TGTCCACCGC GTTGCGTCAG GTGGTGCGTC CCGATGCGCC AGAACGGCTG TCTGTTACAC AGGTGGCCAC GTTAGATTCG TTGAGGTCCG GGGTGGACTC CCAACTGTCC CGGTTGGGTA TGTCCGTAGG GGTGACGTTG TTGGTGTTAA CCACTCTTCT CATTGCGAAC TCCATGATTG TGTCCGTCAT GTCGCGCACT TCGGAAATCG GGTTGCGGCG TGCGCTTGGA TCGTCGCACG CAGACATCGC TCGACTGTTT CTCACCGAAG GCGCCATCAC CGGTGTGTTA GGTGGGCTTG CCGGGGCGGC TGTGGGGGTG GTGGGCACGG TTGTGACCGC ATTAGTCAAT GGGTGGAGTG TGAGCATGCC GTGGTGGCTG CCTCTCATCG GGTTAGCTAT TGGCGCAGTT GTGGGGGTTC TCGCATCGGT GTATCCGGCG TTGTCTGCTG CCAAGGTCAA CCCGGCAACA GCGATCCGCG CCGATTAA
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Protein sequence | MRAFIDTFHD CALDMSARLQ RTLLLVIAVA LGAGTFVMSL GSNVTASHQI TNDMAAGTLD HISVSVSGGT ETRTFPDNAD TRALTLPMVE SSARRLDISI DRVQPNRFTT ANLDDYITDV TVTGVTSGYF DVMDITGGTQ GHWVLDATEH TNVAYLGTTA AQQLGIPTDT PYPTGYQISL AGRRVDVIGI VHSSPRARID HLIIVPYAYA LAVEPTDSQA VLTVRTAIGA GGPVSTALRQ VVRPDAPERL SVTQVATLDS LRSGVDSQLS RLGMSVGVTL LVLTTLLIAN SMIVSVMSRT SEIGLRRALG SSHADIARLF LTEGAITGVL GGLAGAAVGV VGTVVTALVN GWSVSMPWWL PLIGLAIGAV VGVLASVYPA LSAAKVNPAT AIRAD
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