Gene Jden_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0480 
Symbol 
ID8379665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp515374 
End bp516561 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID645003212 
Productprotein of unknown function DUF214 
Protein accessionYP_003160447 
Protein GI256831720 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCGT TCATTGATAC CTTCCACGAC TGCGCCCTCG ACATGAGCGC CCGCCTCCAG 
CGCACACTCC TACTCGTCAT CGCAGTAGCG CTCGGTGCCG GAACATTCGT CATGTCCCTG
GGGTCCAATG TGACCGCCTC CCACCAGATC ACCAACGACA TGGCGGCAGG AACCCTCGAC
CACATCAGTG TGAGCGTCTC CGGCGGAACA GAAACCCGAA CCTTCCCCGA CAATGCCGAC
ACCCGCGCGC TAACCCTCCC CATGGTGGAA TCCTCAGCCC GCAGACTCGA CATCAGCATC
GACCGGGTAC AACCCAACCG GTTCACCACC GCAAACCTCG ACGACTACAT CACAGACGTG
ACCGTCACAG GAGTGACCTC CGGTTACTTC GACGTCATGG ACATCACCGG CGGAACACAA
GGACACTGGG TGCTTGACGC AACCGAACAC ACCAACGTGG CCTACCTCGG TACCACAGCC
GCCCAACAAC TTGGAATCCC CACCGACACC CCCTACCCAA CCGGCTACCA AATCTCACTG
GCAGGACGCC GCGTTGACGT CATCGGGATC GTGCACTCCT CACCACGAGC ACGCATCGAC
CACCTCATCA TCGTGCCCTA CGCCTACGCG CTCGCAGTAG AACCCACTGA CAGTCAAGCA
GTGTTGACGG TGCGCACAGC AATCGGTGCA GGGGGGCCAG TGTCCACCGC GTTGCGTCAG
GTGGTGCGTC CCGATGCGCC AGAACGGCTG TCTGTTACAC AGGTGGCCAC GTTAGATTCG
TTGAGGTCCG GGGTGGACTC CCAACTGTCC CGGTTGGGTA TGTCCGTAGG GGTGACGTTG
TTGGTGTTAA CCACTCTTCT CATTGCGAAC TCCATGATTG TGTCCGTCAT GTCGCGCACT
TCGGAAATCG GGTTGCGGCG TGCGCTTGGA TCGTCGCACG CAGACATCGC TCGACTGTTT
CTCACCGAAG GCGCCATCAC CGGTGTGTTA GGTGGGCTTG CCGGGGCGGC TGTGGGGGTG
GTGGGCACGG TTGTGACCGC ATTAGTCAAT GGGTGGAGTG TGAGCATGCC GTGGTGGCTG
CCTCTCATCG GGTTAGCTAT TGGCGCAGTT GTGGGGGTTC TCGCATCGGT GTATCCGGCG
TTGTCTGCTG CCAAGGTCAA CCCGGCAACA GCGATCCGCG CCGATTAA
 
Protein sequence
MRAFIDTFHD CALDMSARLQ RTLLLVIAVA LGAGTFVMSL GSNVTASHQI TNDMAAGTLD 
HISVSVSGGT ETRTFPDNAD TRALTLPMVE SSARRLDISI DRVQPNRFTT ANLDDYITDV
TVTGVTSGYF DVMDITGGTQ GHWVLDATEH TNVAYLGTTA AQQLGIPTDT PYPTGYQISL
AGRRVDVIGI VHSSPRARID HLIIVPYAYA LAVEPTDSQA VLTVRTAIGA GGPVSTALRQ
VVRPDAPERL SVTQVATLDS LRSGVDSQLS RLGMSVGVTL LVLTTLLIAN SMIVSVMSRT
SEIGLRRALG SSHADIARLF LTEGAITGVL GGLAGAAVGV VGTVVTALVN GWSVSMPWWL
PLIGLAIGAV VGVLASVYPA LSAAKVNPAT AIRAD