| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0411 |
|---|
| Symbol | |
|---|
| ID | 8379597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 434018 |
|---|
| End bp | 434920 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645003142 |
|---|
| Product | NLPA lipoprotein |
|---|
| Protein accession | YP_003160379 |
|---|
| Protein GI | 256831652 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.580913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.932385 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGCT CATCTTTTGC TCGATCCCTT GCCGCTGCGG CTGCTGCCAC GGCCCTCACC
TTCTCGTTGG CCGCGTGCGG TTCGGATTCT GATGCGGACA CCAACGCTGA CAAGGGCACT
GAAGGGAACC CAGTCACCAT CGGTGTTGTG GGAACAGAGG ACTACTGGAC CACGTTTGAG
CAAATCGCTG AAGACGAAGG GATCTTCGTT GAGGTCACTG ACCTTGCTGA CTACCAGGTC
CCTAACCGTG CCCTGGCTGA CGGTGAGATT GACCTGAACC AGTTCCAGCA CCTTCTCTTC
CTGGCGCAGT TCAATGTGGA GGCAGGTGAA GACCTCTCAC CTATTGCGGC AACGGCTGTG
TACCCGCTGG GCGTGTACTC GCAAAAGCAC GACTCCATTG ATTCGATCAC TGGTGGGGAG
ATCGCTGTCC CGAACGACCC CACCAACCTT GCTCGTGCGT TGCTGCTCCT TCAAGATGCT
GGACTGGTGG AACTGAAGGA TGGCGGGTCG GCGTTCTCCA CCGAGTTGGA CGTGCTGCCG
TCATCCAAGG TGACGGTCAC CCCTGTTGAC GCCACTCAAA CAGTGTTGGC GCTGCCCGAT
GTTGAAGCGT CGGTGGTGAA CAACGACTTC CTCAAGGAAG CCGGACTAAC CGCAGACGAT
GCAATCTACG CGGATGACGC CTCCTCAGAT GCGGCGCGCC CCTACATCAA CGTGTGGGTG
TCCCGAGCAG AGGAGAAGGA CAACGAGGTG TACAGCAAGC TTGTGGAGAT TTACAAGCGT
GCTGAGGTTC AAGACGGTGT GCTAGCTGCC TCGGATGGAA CTGCAGCAAT TGCTGACCAG
GATGGCCCAA CCTTGCAGGG CTACTTGGAC GAGATCCAGG CTGATTTCGA AGCATCCAAG
TAA
|
|---|
| Protein sequence | MSRSSFARSL AAAAAATALT FSLAACGSDS DADTNADKGT EGNPVTIGVV GTEDYWTTFE
QIAEDEGIFV EVTDLADYQV PNRALADGEI DLNQFQHLLF LAQFNVEAGE DLSPIAATAV
YPLGVYSQKH DSIDSITGGE IAVPNDPTNL ARALLLLQDA GLVELKDGGS AFSTELDVLP
SSKVTVTPVD ATQTVLALPD VEASVVNNDF LKEAGLTADD AIYADDASSD AARPYINVWV
SRAEEKDNEV YSKLVEIYKR AEVQDGVLAA SDGTAAIADQ DGPTLQGYLD EIQADFEASK
|
|---|
| |