Gene Jden_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0333 
Symbol 
ID8379525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp353701 
End bp355317 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content59% 
IMG OID645003068 
Producthypothetical protein 
Protein accessionYP_003160307 
Protein GI256831580 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.115307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCG ATGCGCCACA TACCTATCAT CACAACGTGA CATCACCATC CACACCCGTG 
GTACCAGCGC CAACCACCAC ACAACCACGC CAAGCAGCCA CCCCACCACA CCTCACCAAC
ACCCAACGGC TCCTAGGCAT CGACCTCGCC CGAGGTCTCG CGCTCATCGG AATGATGGCA
GCACACTTCA TGCTGTCCAC CACCCCCGAA CTCCTGAACC CCACCACCTG GGGCGGACTA
GTCAACGGAC GATCCTCCAT CCTCTTCGCC ACCCTCGCAG GCGTCTCACT CGCCCTCACC
ACAGGCCGCA CCACACCACC CACCGGCGAC GACCTCATCG CCGCACGCGG AAAAATCCTC
ATCCGCGGCG CCACCATCTA CGTCATTGGA GCCTTCCTCA CCGCCCTTGA CACCCCCATC
GCCGTCATCC TCCAAACCTA CGGAATCCTC TTCGCCCTCG CCGTCCCATT CCTCACCCTC
ACACGGCGCA CCCTCATCCT CATCGCCATC CCCCTCACCA TTGTTGGACC ATTACTCACC
TACAGCCTGA CCAGCGCAAG CAACCTCTTC CTCCTCAGCC TGCCCCTACC CGAATCCCTC
TTCAACCCCT CCTACCCGGC GTTATCCTGG ATGCCCTTCA TCCTTACGGG CATGGCCATC
GGCCGCACCA ACCTCACCCT CAAGAAAACC CAAGCAGGAC TCGTCGCACT CGGAGTTGCA
CTCGCAGTCA TCGGGTACAG CTCAGTGACA CTCACCTCCA TGACAGCCGA AGCACTAAGC
ACCGAATCCA GCAACACAGC CAAAGACGAC GACAACACCA CAGACATTGA GACCCCATAC
ATCGACGATC AGGAATACGG CACCGCCACA CTCGAGGACC TTGAACCAGG CCAGTTCCTT
GTCAACGGCT TCGTCCGCGA CGAAATCAAC CTCGAAGGAC TCGAATGCAC CGACTCCACC
TACACCGACT CCACCACTGA TCAACGTGAT GTGAACTGCT ACCGCTACGA GGAACTCTCC
ACCCCCACCG AATCCACGGA GAACATCGAC CTCAATGAGG TCATCCTCGC CCCCGTCCGC
GACCTCGCAA CAACCTGGGC CACCGCAGAC CCCCACTCAG CCACACCACA CGAAATCGTC
GGATCCGGCG GATTCGCCAT CGCTGTCGTT GGCCTGTGCC TGCTCATCGC CCACGCTGCG
CGTTACGTGC TCTACCCCAT CATCGCCATG GGCTCCATGT CGCTCACCAT CTACTCCCTC
CACGTCCTGA CCTACCGGTT CATGCAAGAA ACAGTCATGA TGTCTGGACA ATTCACCTGG
GGACTATGGC TCGGGTCAAT CATTGCGCTC GCTGGTTTCG CGTCCTTGTG GCGCATGAAG
TTCACCAAAG GCCCTCTCGA ACGGGGGGTG AACACCATCA TCCGAGCGAC CACCCCTCAT
GGGGAATGCT CCCCGATGAC AGATTCGCGA TTTTCTGCTA ACAGCAAGTC TGCCAGCGGT
TTTGACGCAT CGACAGATGT CAAGAAACCG CAGGAACTCG CGGAAAGTTC ACCCGCACAA
CACGGAACTG GGGATCCTGA CCCCACCAAC CAGGAACAAT GCAAGGACAC ACCATAG
 
Protein sequence
MRPDAPHTYH HNVTSPSTPV VPAPTTTQPR QAATPPHLTN TQRLLGIDLA RGLALIGMMA 
AHFMLSTTPE LLNPTTWGGL VNGRSSILFA TLAGVSLALT TGRTTPPTGD DLIAARGKIL
IRGATIYVIG AFLTALDTPI AVILQTYGIL FALAVPFLTL TRRTLILIAI PLTIVGPLLT
YSLTSASNLF LLSLPLPESL FNPSYPALSW MPFILTGMAI GRTNLTLKKT QAGLVALGVA
LAVIGYSSVT LTSMTAEALS TESSNTAKDD DNTTDIETPY IDDQEYGTAT LEDLEPGQFL
VNGFVRDEIN LEGLECTDST YTDSTTDQRD VNCYRYEELS TPTESTENID LNEVILAPVR
DLATTWATAD PHSATPHEIV GSGGFAIAVV GLCLLIAHAA RYVLYPIIAM GSMSLTIYSL
HVLTYRFMQE TVMMSGQFTW GLWLGSIIAL AGFASLWRMK FTKGPLERGV NTIIRATTPH
GECSPMTDSR FSANSKSASG FDASTDVKKP QELAESSPAQ HGTGDPDPTN QEQCKDTP