Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0333 |
Symbol | |
ID | 8379525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 353701 |
End bp | 355317 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645003068 |
Product | hypothetical protein |
Protein accession | YP_003160307 |
Protein GI | 256831580 |
COG category | [S] Function unknown |
COG ID | [COG3503] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.115307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCCG ATGCGCCACA TACCTATCAT CACAACGTGA CATCACCATC CACACCCGTG GTACCAGCGC CAACCACCAC ACAACCACGC CAAGCAGCCA CCCCACCACA CCTCACCAAC ACCCAACGGC TCCTAGGCAT CGACCTCGCC CGAGGTCTCG CGCTCATCGG AATGATGGCA GCACACTTCA TGCTGTCCAC CACCCCCGAA CTCCTGAACC CCACCACCTG GGGCGGACTA GTCAACGGAC GATCCTCCAT CCTCTTCGCC ACCCTCGCAG GCGTCTCACT CGCCCTCACC ACAGGCCGCA CCACACCACC CACCGGCGAC GACCTCATCG CCGCACGCGG AAAAATCCTC ATCCGCGGCG CCACCATCTA CGTCATTGGA GCCTTCCTCA CCGCCCTTGA CACCCCCATC GCCGTCATCC TCCAAACCTA CGGAATCCTC TTCGCCCTCG CCGTCCCATT CCTCACCCTC ACACGGCGCA CCCTCATCCT CATCGCCATC CCCCTCACCA TTGTTGGACC ATTACTCACC TACAGCCTGA CCAGCGCAAG CAACCTCTTC CTCCTCAGCC TGCCCCTACC CGAATCCCTC TTCAACCCCT CCTACCCGGC GTTATCCTGG ATGCCCTTCA TCCTTACGGG CATGGCCATC GGCCGCACCA ACCTCACCCT CAAGAAAACC CAAGCAGGAC TCGTCGCACT CGGAGTTGCA CTCGCAGTCA TCGGGTACAG CTCAGTGACA CTCACCTCCA TGACAGCCGA AGCACTAAGC ACCGAATCCA GCAACACAGC CAAAGACGAC GACAACACCA CAGACATTGA GACCCCATAC ATCGACGATC AGGAATACGG CACCGCCACA CTCGAGGACC TTGAACCAGG CCAGTTCCTT GTCAACGGCT TCGTCCGCGA CGAAATCAAC CTCGAAGGAC TCGAATGCAC CGACTCCACC TACACCGACT CCACCACTGA TCAACGTGAT GTGAACTGCT ACCGCTACGA GGAACTCTCC ACCCCCACCG AATCCACGGA GAACATCGAC CTCAATGAGG TCATCCTCGC CCCCGTCCGC GACCTCGCAA CAACCTGGGC CACCGCAGAC CCCCACTCAG CCACACCACA CGAAATCGTC GGATCCGGCG GATTCGCCAT CGCTGTCGTT GGCCTGTGCC TGCTCATCGC CCACGCTGCG CGTTACGTGC TCTACCCCAT CATCGCCATG GGCTCCATGT CGCTCACCAT CTACTCCCTC CACGTCCTGA CCTACCGGTT CATGCAAGAA ACAGTCATGA TGTCTGGACA ATTCACCTGG GGACTATGGC TCGGGTCAAT CATTGCGCTC GCTGGTTTCG CGTCCTTGTG GCGCATGAAG TTCACCAAAG GCCCTCTCGA ACGGGGGGTG AACACCATCA TCCGAGCGAC CACCCCTCAT GGGGAATGCT CCCCGATGAC AGATTCGCGA TTTTCTGCTA ACAGCAAGTC TGCCAGCGGT TTTGACGCAT CGACAGATGT CAAGAAACCG CAGGAACTCG CGGAAAGTTC ACCCGCACAA CACGGAACTG GGGATCCTGA CCCCACCAAC CAGGAACAAT GCAAGGACAC ACCATAG
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Protein sequence | MRPDAPHTYH HNVTSPSTPV VPAPTTTQPR QAATPPHLTN TQRLLGIDLA RGLALIGMMA AHFMLSTTPE LLNPTTWGGL VNGRSSILFA TLAGVSLALT TGRTTPPTGD DLIAARGKIL IRGATIYVIG AFLTALDTPI AVILQTYGIL FALAVPFLTL TRRTLILIAI PLTIVGPLLT YSLTSASNLF LLSLPLPESL FNPSYPALSW MPFILTGMAI GRTNLTLKKT QAGLVALGVA LAVIGYSSVT LTSMTAEALS TESSNTAKDD DNTTDIETPY IDDQEYGTAT LEDLEPGQFL VNGFVRDEIN LEGLECTDST YTDSTTDQRD VNCYRYEELS TPTESTENID LNEVILAPVR DLATTWATAD PHSATPHEIV GSGGFAIAVV GLCLLIAHAA RYVLYPIIAM GSMSLTIYSL HVLTYRFMQE TVMMSGQFTW GLWLGSIIAL AGFASLWRMK FTKGPLERGV NTIIRATTPH GECSPMTDSR FSANSKSASG FDASTDVKKP QELAESSPAQ HGTGDPDPTN QEQCKDTP
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