Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0312 |
Symbol | |
ID | 8379505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 333290 |
End bp | 334060 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645003048 |
Product | NERD domain protein |
Protein accession | YP_003160287 |
Protein GI | 256831560 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000707319 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0160162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAATC CAGCGGGGCG ATTGAGCAGA GATGAACGCA ACGAACGTGG GGTGCGAGGA GAGCGAGCTA CCCGCACCAT CATGGGACTG TTAACCCCCG AAGAACACCT TGTTGCGCAC GACCTGCCGT GGCCGGGCAG GCCCCAAGCC AACATCGACC ATCTCGTGGT CAACGCACAG GGCGTGTTCG TCCTCGACAC AAAAAACTGG TCCGGTACCG TCACCGCAAC AGACGGTGAA CTACGCCAAA ACGGGAACTC GCGGGCTAGT GTGCTGGAGA AAATGCGGGA CCAAGGCGCC GCCATCAACT CAATGATCAC CGCGGTCCGG GTGGACAACC CCACCCTCCC ACCTGTTCCC ATTCACCCCA TCCTCGTGCT CGCCGCACAA ACCGGCATCA GTGAACACAT CACCACCGTG CACGTGGTCA CCCTGGACCA ACTGTTGCCC GCACTCACCA CCAAACCACC GGTACTGGAC GCCCAACAGG TCCGCACACT GGCCTACCAC CTGGCTGAAA CACTTGACTT CGACCGCGAA GTCACCCTCC TCAACGCCGC AACCGCACGC GCCCAAGCCC GCACCAACCC CCTACCCCGA CGCGAAAAAA AGGGCACAAA AAAACCCAGC GCACGCGCTG AGCTCGCCGG GATCCTCCGC TTACTCCTCA TGGGGGCGGG GCTGCTGTTC GTCATCACCC AACCCGACCT AGTCGCCAGC TTCGGTCACT GGATCAGCAC CACAATCACC AACCTCATCA CACCCAACTA A
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Protein sequence | MSNPAGRLSR DERNERGVRG ERATRTIMGL LTPEEHLVAH DLPWPGRPQA NIDHLVVNAQ GVFVLDTKNW SGTVTATDGE LRQNGNSRAS VLEKMRDQGA AINSMITAVR VDNPTLPPVP IHPILVLAAQ TGISEHITTV HVVTLDQLLP ALTTKPPVLD AQQVRTLAYH LAETLDFDRE VTLLNAATAR AQARTNPLPR REKKGTKKPS ARAELAGILR LLLMGAGLLF VITQPDLVAS FGHWISTTIT NLITPN
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