| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0218 |
|---|
| Symbol | |
|---|
| ID | 8379413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 233185 |
|---|
| End bp | 233880 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645002952 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003160195 |
|---|
| Protein GI | 256831468 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.489811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGTA ATGTTGTGTT GCAGGCGTCA GGGTTACGCC GAACACTTCA CTTGCCGGGA
GGTTCGCAAC TCCCCATTCT TCGTGGGGTG GATCTAACCG TCTACGCTGG TCAGTCGCTT
GCTATTGTGG GTCGATCAGG GTCAGGGAAA ACGACCCTTC TCTCCCAACT GGGTTTGCTG
TCACCGCCTG ATGACGGGGT GCTGACCATT CTCGATAAGA AGACCAATGA ATTAAGTGAT
TCGGCGCGTG CGGCATTACG CAATGCCTCC CTTGGTTACA TTTTCCAGTC GTATTCACTT
GTCCCGCATT TCACAGCGCG TCGAAATGTT GAACTCCCGA TGCGATACGC GACCCGGGTT
TCGCGGTTGG ACAGGAAGGA ACGTGTCTCT CACGTTCTTG AGCTGGTTGG ACTCGCTGAG
CGCGCACAGT CAAAACCGCG GCATCTATCT GGGGGAGAGC AGCAGCGTGT TGCTATAGCG
CGGGCCCTCG TGCACAATCC TGCGCTGATC CTTGCTGACG AACCCACTGG GGCGCTTGAC
ACGACAACAG CTGATACTGT GCTCGACATT CTCCAACGGG CAACTCAAGC GCAAGGCGCC
GCACTGATTG TTGTTACCCA TGACCCTGCC ATCGCGAACC GTATGGACAG GCGGGCCGTC
ATGCATGACG GCAAGCTCAC TGAGGAGTGT GGATGA
|
|---|
| Protein sequence | MTSNVVLQAS GLRRTLHLPG GSQLPILRGV DLTVYAGQSL AIVGRSGSGK TTLLSQLGLL
SPPDDGVLTI LDKKTNELSD SARAALRNAS LGYIFQSYSL VPHFTARRNV ELPMRYATRV
SRLDRKERVS HVLELVGLAE RAQSKPRHLS GGEQQRVAIA RALVHNPALI LADEPTGALD
TTTADTVLDI LQRATQAQGA ALIVVTHDPA IANRMDRRAV MHDGKLTEEC G
|
|---|
| |