Gene Jden_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0105 
Symbol 
ID8379302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp117296 
End bp118309 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content59% 
IMG OID645002840 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003160084 
Protein GI256831357 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.778561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.320434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGA CCACCAGCAC CCACATCCAG CTCGCTTCTC GCCCCACCGG GTGGCCATCC 
CAGGACAACT TCACCACCGT CACCGTCACC TACCCAGACC TCGGTCCAGG TCAGATCCGC
GTCCGTAACG ACTACATGTC CGTTGACCCC TACATGCGCG GACGACTCAA CGAAGGCCGG
TCCTACATTC CGCCCTTCCA GATTGGTGAC ACCCTCACCG GTGGTGCCAT CGGCACCGTC
ATTGACAGCA ACTCATCCGA CCATCCCGTG GGAGCAACAG TCATCCACCA GTACGGGTGG
CGTGACATCG CCCAAGACGA CGCCACCCAC TTCCGGGTCG TCCCCAAACT TCCACACCTT
CCAAGCTCCC TTTACCTCGG GATGCTCGGC ATGACCGGGC TGACCGCCTA CGTGGGACTC
ACCGACATCG CCCCCGTCCA CCATGGTGAC ACCGTGTTCA TCTCTGGCGC AGCCGGAGCT
GTCGGAACCG CAGCCGGCCA GATCGCACGA CTCCTCGGCG CATCGACCGT CATCGGATCT
GCCGGGTCAG CAGAAAAAAT CAACCTTCTC ACCAGTAAAT ACGGTTACGA CGTTGCCTTG
AATTACAAAG ACGCCCCCAT TGCCGAGCAA CTTGCCACTG CAGCACCCAC CGGAATCGAC
GTGTTCTTCG ACAACGTGGG CGGAGACCAC CTCGAAGCAG CCCTAGACGC CATGAAAGAC
GGCGGTCGCA TCGCCCTCTG TGGCGCGATC TCCAGCTACA ACACCACGGA GAAACCTGCC
GGCCCCCGCA ACATGATGAA CATCATTTCC CGCGGCCTCA CCCTCAAAGG CTTCACCCTC
GGTGGTTATA TGCACCGCAA CACAGAATTC ATGGAGAAAA TGGGCGCCTG GCTACAAAAC
GGTGACGTCA CCTACGACGA AACAATCGTC GAAGGAATCG ACAACGCCGT CGACGCCTTC
CTCACCATGA TGCAAGGCGG GAACATCGGA AAAATGATTG TGAAACTCAG CTAA
 
Protein sequence
MSTTTSTHIQ LASRPTGWPS QDNFTTVTVT YPDLGPGQIR VRNDYMSVDP YMRGRLNEGR 
SYIPPFQIGD TLTGGAIGTV IDSNSSDHPV GATVIHQYGW RDIAQDDATH FRVVPKLPHL
PSSLYLGMLG MTGLTAYVGL TDIAPVHHGD TVFISGAAGA VGTAAGQIAR LLGASTVIGS
AGSAEKINLL TSKYGYDVAL NYKDAPIAEQ LATAAPTGID VFFDNVGGDH LEAALDAMKD
GGRIALCGAI SSYNTTEKPA GPRNMMNIIS RGLTLKGFTL GGYMHRNTEF MEKMGAWLQN
GDVTYDETIV EGIDNAVDAF LTMMQGGNIG KMIVKLS