Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4246 |
Symbol | |
ID | 3932398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007801 |
Strand | + |
Start bp | 35136 |
End bp | 36257 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637902303 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_512186 |
Protein GI | 89057732 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.466913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCC TGATCACGGG CGGGGCCGGG TTCATCGGTT CGCATACCGC CGATGCGCTG CTGGCCCTCG GTCACGAGGT GCGCGTGCTC GATATCCTGC AGGAGCCCGT GCATCGGGGG GGGGCATGGC CGGCCTATCT GGATCCCGCC ATCGAACGTA TTCAGGGCGA CGTCCGCGAC GAGGCGGTGT TGCTTGACGC GCTTAGGGGC GTCGATGCGG TCTACCATCT GGCCGCCTTT CAGGATTACC TGCCGGAATT CAGCCGCTTT TTCTCGACCA ATGTCACCTC GACTGCCCTG ATCTACGAGC TGATCGTGCG AGAGAACCTG CCCATTCAGA AGGTCATCGT GGCCTCAAGC CAGGCAGCCC TTGGCGAAGG TCTTTATCTT GATGCCCACG GCCAGCGGGT TTTGCCGGGC CTGCGCCGTG ATGCGGATCT GCGGCGCGGT GTGTGGGACA TCCAACCCGG CCCCGGCCAG GCGGGCCCTC TCACCTATCA GCCCACCGAT GAAAGCGTCG CCAACCCGCA AAACTGCTAT GGCACCTCCA AGATCGCGCA GGAAAACGCC GCCCTGAACC TTGGGCGGAT GTATCAGATC CCGACTGTGG CGATGCGCTA TTCCATCGTG CAGGGCCCGC GCCAAAGTCT CTATAATGCC TATTCGGGAG CGTGCCGGAT ATTTTCGCTG TCTTTCCATC TGGGGCGCGC GCCGGTGATC TACGAGGACG GCGCGCAAGT GCGTGATTTC GTCAATTACC GCGATGTGGT CGATGCCAAT CTCTGCGTGC TGACCGACAC CCGTGCCGAT TACGAGATGT TCAATGTGGG CGGCGATGCG CCCGTCTCCG TGTCTGAATT TGCCTCTGTC GTGGGCGAGG TCTTCCAGCA TGACGGCTAC ATGCCGACCG CGTCAGGCAA GTACCGCTTC GGCGACACAC GGCATATCCT GTCAGACGTC TCGAAACTGA AGGCCCTTGG CTGGCGGCCC ACCCGGTCAT GCCGTGACAG TGTTACCGCC TATCGCGACT GGATGGAAAA CGCCGCCCCG CCCGCCGAAA TCCTTGAGCA ATCCGAAAAA ATGATGGCCG CGCTTGGCGT TGTCCGCACG GTGGGAGGGT AG
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Protein sequence | MKILITGGAG FIGSHTADAL LALGHEVRVL DILQEPVHRG GAWPAYLDPA IERIQGDVRD EAVLLDALRG VDAVYHLAAF QDYLPEFSRF FSTNVTSTAL IYELIVRENL PIQKVIVASS QAALGEGLYL DAHGQRVLPG LRRDADLRRG VWDIQPGPGQ AGPLTYQPTD ESVANPQNCY GTSKIAQENA ALNLGRMYQI PTVAMRYSIV QGPRQSLYNA YSGACRIFSL SFHLGRAPVI YEDGAQVRDF VNYRDVVDAN LCVLTDTRAD YEMFNVGGDA PVSVSEFASV VGEVFQHDGY MPTASGKYRF GDTRHILSDV SKLKALGWRP TRSCRDSVTA YRDWMENAAP PAEILEQSEK MMAALGVVRT VGG
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