| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4241 |
|---|
| Symbol | |
|---|
| ID | 3932393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007801 |
|---|
| Strand | + |
|---|
| Start bp | 29475 |
|---|
| End bp | 30509 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637902298 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_512181 |
|---|
| Protein GI | 89057727 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.954159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAGTC TCTCAGAGTC TACAGAATGC CGAGTTGTCT TTGGAGACTT CGGAGCCCGC
GGTTGGGATC CAATCAGTCA TATGGCCAGT CTGGCTTCAG AGCTTTTCGA GACCCCCCTG
GTCTGCCCTC AGCAACAAAA ACTCTCGGTT TGGCGGCATG CCAGGATGAT GGCCTTGCCC
GTACCCCGTG CTGCGTCCGA TTGGACGCTC TATATTGCTA GAAGTCCCAG TTACCTTAAA
CGCTACCTCG CGTTACCGGA GTTCACCAGA CCAGGACGCC GCGCGATATG GATCATTGAC
AGCTTCCGCA CCGAAATCAT GCCTCATTCG GCCCTTTTTC GGCATTTTGA CTTGGTTGCC
TACACCCAAA AAGGTGAAGC GCCCGCCTAC AACGCCGTCG CGCCGGGACG GACGGTTTTC
CTAGGCTGGG GAACTGACGC TTTGAGGCTG GGGACCAGTG AGGGCGCGCG CGACATTGAT
GTCCTACGCG TCGGGCGACA ACCCGAGACA TGGACAGATG ACAGCCGCAG TGCCATTACC
TGCGCAGCGT CAGGCCTGCA CTTTCATGGA CGTCCGCCAG CGGACGAGTC CGCCACCCCC
ACAGCCGCAC AACGCCATCT GATGCGCTGG TATGGTCGGG CAAAGTTTCT CATTGCCTTC
TCCAATCTTG CCGCACCCGC CAGTTATACC CACCCGACCA AAGACTACAT CACGGGACGG
TGGACCGATG CCTTGGCCGC GGGCGCGGTT GTCGCCGGCA TCTCCCCTTT CCAAGATGCC
TCCCGCGAAG ATCTGCTTTG GCCCGGGGCC ACACTTGAGT TCCACGGCAT AGATCTGACG
TCCAATACAG AAGTCCTCCG TAAAGCCGTC GAGGTTTGGT CGCCAGACAT CGCTCGTCAC
AATCACAAAA TGGCCTTAGA GAAACTCGAC TGGAGATGGC GGTTTCAGAC TTTGGCCCGG
CGCATGAACA TCACTGCCCC AATGCTAAAG GCCGAGATCA CGCAATTGGA GAATATGCTG
TCGACGGCGG GATAA
|
|---|
| Protein sequence | MVSLSESTEC RVVFGDFGAR GWDPISHMAS LASELFETPL VCPQQQKLSV WRHARMMALP
VPRAASDWTL YIARSPSYLK RYLALPEFTR PGRRAIWIID SFRTEIMPHS ALFRHFDLVA
YTQKGEAPAY NAVAPGRTVF LGWGTDALRL GTSEGARDID VLRVGRQPET WTDDSRSAIT
CAASGLHFHG RPPADESATP TAAQRHLMRW YGRAKFLIAF SNLAAPASYT HPTKDYITGR
WTDALAAGAV VAGISPFQDA SREDLLWPGA TLEFHGIDLT SNTEVLRKAV EVWSPDIARH
NHKMALEKLD WRWRFQTLAR RMNITAPMLK AEITQLENML STAG
|
|---|
| |