| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4178 |
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| Symbol | fliP |
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| ID | 3936667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4287218 |
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| End bp | 4287949 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637906564 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_512120 |
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| Protein GI | 89056669 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGCGGC CTGACCTTAC CCGTTGTCTT GTTGTCGCTG CCCTTCTCGC GATCAGCTGG
CCCAGCGCCG CCATCGCACA GGAGATCTCC CTTGATCTAG GTGATGGGAG CAGCCTGACG
GCGCGATCGT TCCAGTTGAT CGCGCTGATT TCAGTTCTCA GCCTGGCACC GGGGTTGGCT
GTTATGGTCA CCTGCTTCCC GTTTGTTGTC ACGGTGTTGT CAATCCTGAG GCAGGCGATC
GGTCTGCAAC AGTCACCTCC CAACATGCTG ATCGTCAGCC TTGCACTTTT CTTGACGTAT
TTCGTGATGG CTCCGGTATT TGAGGAAGCG TATCGCGCCG GCATCGCTCC GCTGATTGCA
GGAGAGCTGA CCCCGGATGC CGCGATCCCG CTGATCTATG AGCCTTTTCG GGGCTTCATG
CTGAACCGCG TGGACACATC AACGCTGGTC AGCTTGGCAG AATTGCGGCC CGGTGCCGAC
GCTGCAAATC CGGATCCGTC CGTCTTGATT CCGTCGTTCA TGTTGAGCGA AGTCGAACGC
GCGTTTCAAA TCGGATTCCT CGTTTTTCTG CCCTTCCTCG TCATCGACTT GGTCGTGGCA
GCGATTCTCA TGTCGATGGG CATGATGATG GTACCCCCCG CAATCGTGTC GCTGCCGTTC
AAGCTGGCAT TTTTCGTTGT TGCTGACGGG TGGGCCCTGA TTACGGGCGC TCTGGTCCGC
AGTTATTTCT AG
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| Protein sequence | MRRPDLTRCL VVAALLAISW PSAAIAQEIS LDLGDGSSLT ARSFQLIALI SVLSLAPGLA
VMVTCFPFVV TVLSILRQAI GLQQSPPNML IVSLALFLTY FVMAPVFEEA YRAGIAPLIA
GELTPDAAIP LIYEPFRGFM LNRVDTSTLV SLAELRPGAD AANPDPSVLI PSFMLSEVER
AFQIGFLVFL PFLVIDLVVA AILMSMGMMM VPPAIVSLPF KLAFFVVADG WALITGALVR
SYF
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