| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4152 |
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| Symbol | |
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| ID | 3936641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4264192 |
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| End bp | 4265106 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637906538 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_512094 |
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| Protein GI | 89056643 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.983526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAAACG AGGAATTCCG CGCCATTGCC ATTAGCGTCG TTAATGGCAA GATTGACCTT
ATGGCCCGTT CTCTTCCCCC GCTCACTTGG TTTCGCTCGT TTGAGGCGTC AGCCCGCACG
CTGAGTTTCA CGGCCGCCGC AGATGAGCTT GGCCTGACCC AGTCTGCGAT CAGCCAGCAG
GTCCGGTCGC TTGAACTACG ATTGGGTGTG GCGCTGTTTG TGCGCAAGCC GCGGGGTCTG
ATCCTGACAG ATGAGGGGCG CACGTTGCAG CCAAAGGTGG GCGCGTCGCT GGATCAACTT
GGCCGCGCCA CAGCTGAGTT TGAGACTGGG CCAACGGAGG GGCTGTTGAC TGTCGCGGCC
TCGGTCAGTG TCGTGCGCTG GATCATCGCG CCCCGGATGA CTGAGTTTAC GCGCCAGATC
CCCGGCCTGC GTATTCGGCT TCTCGGTATG ATCTGGCCCG ATGAGTTCAA GGCCGCGCTT
GCGGATGTGG AGATCCGCTT TGGGTCTGAC CGGCAGGTCG GGCGCGACGC CACGCGACTT
GGACCGGACG CGCTGATCGC CGTTGCCGCG CGCCCATTGG CTGGTCCGTT GGCTGCCCAG
ACCCTGATTG AGCCCGTCGG CATGTCTGAG GGGTGGCGCG ATTGGGCGAA GACCTCTGGC
GTTGAGGGCG TGCCGGAGCC CACGCTTTTT GTGGATTCCC ATGGGGCGGC GCTGGATCTG
GCTGTTGGCG GGGCGGGTGT GGCGTTGACC TCCTCACTTC TTGCGGCGCG CGCACTGGCG
CAGGGCGATC TGGTGCAGGT GCATGACGCA ACGATCCCTA GCACCCAAGG CTATCACCTG
GCCGTCACGG CGCCATCGGC TGAGGCGAAG GCCTTTGGCG ACTGGGTAAC GGAATGCGCG
CGCGACCCGG CTTAG
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| Protein sequence | MTNEEFRAIA ISVVNGKIDL MARSLPPLTW FRSFEASART LSFTAAADEL GLTQSAISQQ
VRSLELRLGV ALFVRKPRGL ILTDEGRTLQ PKVGASLDQL GRATAEFETG PTEGLLTVAA
SVSVVRWIIA PRMTEFTRQI PGLRIRLLGM IWPDEFKAAL ADVEIRFGSD RQVGRDATRL
GPDALIAVAA RPLAGPLAAQ TLIEPVGMSE GWRDWAKTSG VEGVPEPTLF VDSHGAALDL
AVGGAGVALT SSLLAARALA QGDLVQVHDA TIPSTQGYHL AVTAPSAEAK AFGDWVTECA
RDPA
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